Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_J13
(1218 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 32 0.87
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 31 1.2
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 31 1.5
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 31 1.5
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 30 2.7
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 29 6.2
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 29 6.2
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 29 6.2
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 29 6.2
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 29 6.2
At5g59170.1 68418.m07416 proline-rich family protein contains pr... 29 8.1
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 29 8.1
At1g61080.1 68414.m06877 proline-rich family protein 29 8.1
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 31.9 bits (69), Expect = 0.87
Identities = 31/153 (20%), Positives = 35/153 (22%), Gaps = 4/153 (2%)
Frame = +3
Query: 456 PXPXXHXXAPPPXKXXAXTXRKAGPXXXXPPXAPXXPXXXDXXAVSXXXPPXXXX*TXXX 635
P P PPP P P +P P V PP
Sbjct: 512 PPPVYSPPPPPPVYSPPPPPPVYSPPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVH 571
Query: 636 XXPPPXXRXXAXXXXPXP---HXXPXPXXXXXXXXXTXNXXXSAXXXXPTXXXXXPPT-K 803
PPP P P H P P + + P PP
Sbjct: 572 SPPPPVHSPPPPVYSPPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPPPVHSPPPPVFS 631
Query: 804 PSXXRHPXRXXXXXRXPPAQXVXAXPXXAXPPP 902
P H PP P + PPP
Sbjct: 632 PPPPVHSPPPPVYSPPPPVYSPPPPPVKSPPPP 664
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 31.5 bits (68), Expect = 1.2
Identities = 34/164 (20%), Positives = 38/164 (23%), Gaps = 5/164 (3%)
Frame = +3
Query: 441 PXXQXPXPXXHXXAPPPXKXXAXTXRKAGPXXXXPP---XAPXXPXXXDXXAVSXXXPPX 611
P P P H PPP P PP +P P V PP
Sbjct: 672 PPVYSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPV 731
Query: 612 XXX*TXXXXXPPPXXRXXAXXXXPXPHXXPXPXXXXXXXXXTXNXXXSAXXXXPTXXXXX 791
PPP + P P P P + P
Sbjct: 732 QSPPPPPVFSPPPPAPIYS--PPPPPVHSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPP 789
Query: 792 PPT-KPSXXRHPXRXXXXXRXPPAQXVXAXPXXAXP-PPXTKTL 917
PP P H PP P P PP T +
Sbjct: 790 PPVHSPPPPVHSPPPPSPIYSPPPPVFSPPPKPVTPLPPATSPM 833
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 31.1 bits (67), Expect = 1.5
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +1
Query: 481 PPPPRXTXPXPYVKXALXXPXPPXPXXXXQXXTXGPSPXTXPLXXTP 621
PPPP P P P PP P P P P+ P
Sbjct: 452 PPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPP 498
Score = 30.7 bits (66), Expect = 2.0
Identities = 33/157 (21%), Positives = 34/157 (21%)
Frame = +3
Query: 432 LXXPXXQXPXPXXHXXAPPPXKXXAXTXRKAGPXXXXPPXAPXXPXXXDXXAVSXXXPPX 611
L P P P + PP P PP P P PP
Sbjct: 402 LPPPSLPSPPPPAPIFSTPPTLTSPPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPP 461
Query: 612 XXX*TXXXXXPPPXXRXXAXXXXPXPHXXPXPXXXXXXXXXTXNXXXSAXXXXPTXXXXX 791
PPP P P P P P
Sbjct: 462 PVYSPPPPPPPPPPPPPVYSPPPPSP-PPPPPPVYSPPPPPPPPPPPPVYSPPPPPVYSS 520
Query: 792 PPTKPSXXRHPXRXXXXXRXPPAQXVXAXPXXAXPPP 902
PP PS P R PP P PPP
Sbjct: 521 PPPPPSPAPTP---VYCTRPPPPPPHSPPPPQFSPPP 554
Score = 28.7 bits (61), Expect = 8.1
Identities = 30/149 (20%), Positives = 32/149 (21%)
Frame = +3
Query: 456 PXPXXHXXAPPPXKXXAXTXRKAGPXXXXPPXAPXXPXXXDXXAVSXXXPPXXXX*TXXX 635
P P PPP P P P P PP
Sbjct: 491 PPPVYSPPPPPPPPPPPPVYSPPPPPVYSSPPPPPSPAPTPVYCTRPPPPPPHSPPPPQF 550
Query: 636 XXPPPXXRXXAXXXXPXPHXXPXPXXXXXXXXXTXNXXXSAXXXXPTXXXXXPPTKPSXX 815
PPP + P PH P P P PP P
Sbjct: 551 SPPPPEPYYYS--SPPPPHSSPPPHSPPPPHSPPPPIYPYLSPPPPPTPVSSPPPTPVYS 608
Query: 816 RHPXRXXXXXRXPPAQXVXAXPXXAXPPP 902
P PP + P PPP
Sbjct: 609 PPPPPPCIEPPPPPPCIEYSPP---PPPP 634
>At1g31810.1 68414.m03904 formin homology 2 domain-containing protein
/ FH2 domain-containing protein low similarity to
SP|P48608 Diaphanous protein {Drosophila melanogaster};
contains Pfam profile PF02181: Formin Homology 2(FH2)
Domain
Length = 1201
Score = 31.1 bits (67), Expect = 1.5
Identities = 33/159 (20%), Positives = 38/159 (23%)
Frame = +3
Query: 426 RGLXXPXXQXPXPXXHXXAPPPXKXXAXTXRKAGPXXXXPPXAPXXPXXXDXXAVSXXXP 605
R + P Q P P PPP + A P PP P + P
Sbjct: 585 RSIPPPLAQPPPPRPPPPPPPPPSSRSIPSPSAPP--PPPPPPPSFGSTGNKRQAQPPPP 642
Query: 606 PXXXX*TXXXXXPPPXXRXXAXXXXPXPHXXPXPXXXXXXXXXTXNXXXSAXXXXPTXXX 785
P PPP R A P P P + P
Sbjct: 643 P----------PPPPPTRIPAAKCAPPPPPPPPTSHSGSIRVGPPSTPPPPPPPPPKANI 692
Query: 786 XXPPTKPSXXRHPXRXXXXXRXPPAQXVXAXPXXAXPPP 902
P P+ P PP A PPP
Sbjct: 693 SNAPKPPAPPPLPPSSTRLGAPPPPPPPPLSKTPAPPPP 731
Score = 29.9 bits (64), Expect = 3.5
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +1
Query: 481 PPPPRXTXPXPYVKXALXXPXPPXPXXXXQXXTXGPSP 594
PPPP P P P PP P + + GP P
Sbjct: 718 PPPPLSKTPAPPPPPLSKTPVPPPPPGLGRGTSSGPPP 755
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 30.3 bits (65), Expect = 2.7
Identities = 31/149 (20%), Positives = 38/149 (25%)
Frame = +3
Query: 456 PXPXXHXXAPPPXKXXAXTXRKAGPXXXXPPXAPXXPXXXDXXAVSXXXPPXXXX*TXXX 635
P P + PPP + P P +P P PP
Sbjct: 505 PPPYVYSSPPPPYVYSSPPPPPPSPPPPCPESSPPPPVVYYAPVTQSPPPPSPVYYPPVT 564
Query: 636 XXPPPXXRXXAXXXXPXPHXXPXPXXXXXXXXXTXNXXXSAXXXXPTXXXXXPPTKPSXX 815
PPP + P P P T + + P PP PS
Sbjct: 565 QSPPP----PSPVYYPPVTNSPPPPSPVYYPPVTYSPPPPSPVYYPQVTPSPPP--PSPL 618
Query: 816 RHPXRXXXXXRXPPAQXVXAXPXXAXPPP 902
+P PP V P PPP
Sbjct: 619 YYP---PVTPSPPPPSPVYYPPVTPSPPP 644
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 29.1 bits (62), Expect = 6.2
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +1
Query: 481 PPPPRXTXPXPYVKXALXXPXPPXPXXXXQXXTXGPSP 594
PPPP+ T P P P P P T P P
Sbjct: 70 PPPPQSTSPPPVATTPPALPPKPLPPPLSPPQTTPPPP 107
Score = 28.7 bits (61), Expect = 8.1
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Frame = +1
Query: 481 PPPPRXTXPXPYVKXALXXPXPPXPXXXXQXXTXGPSP--XTXPL 609
PPPP T P P P P P T P P T PL
Sbjct: 124 PPPPAITPPPPLATTPPALPPKPLPPPLSPPQTTPPPPPAITPPL 168
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 29.1 bits (62), Expect = 6.2
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +1
Query: 481 PPPPRXTXPXPYVKXALXXPXPPXPXXXXQXXTXGPSPXTXPLXXTP 621
PPPP P P P PP P P P P +P
Sbjct: 394 PPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPPPYVYPPPPSP 440
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 29.1 bits (62), Expect = 6.2
Identities = 16/55 (29%), Positives = 19/55 (34%)
Frame = +1
Query: 484 PPPRXTXPXPYVKXALXXPXPPXPXXXXQXXTXGPSPXTXPLXXTPRXXXLXXLP 648
PPP P P + P PP P P+P T P +P LP
Sbjct: 93 PPPPVASPPPATPPPVATP-PPAPLASPPAQVPAPAPTTKPDSPSPSPSSSPPLP 146
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 29.1 bits (62), Expect = 6.2
Identities = 16/55 (29%), Positives = 19/55 (34%)
Frame = +1
Query: 484 PPPRXTXPXPYVKXALXXPXPPXPXXXXQXXTXGPSPXTXPLXXTPRXXXLXXLP 648
PPP P P + P PP P P+P T P +P LP
Sbjct: 93 PPPPVASPPPATPPPVATP-PPAPLASPPAQVPAPAPTTKPDSPSPSPSSSPPLP 146
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 29.1 bits (62), Expect = 6.2
Identities = 18/61 (29%), Positives = 20/61 (32%)
Frame = +2
Query: 425 PRXSPTEXXXPXXXPTXXGPPPXEXXRPDXT*SXPXXXXPPPGPXXPXXXXXXGRLRXPA 604
P SP+ P PPP P P PPP P P +L PA
Sbjct: 46 PPPSPSPEPEPEPADCPPPPPPPPCPPPPSPPPCPPPPSPPPSPPPPQLPPPP-QLPPPA 104
Query: 605 P 607
P
Sbjct: 105 P 105
>At5g59170.1 68418.m07416 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 288
Score = 28.7 bits (61), Expect = 8.1
Identities = 21/86 (24%), Positives = 21/86 (24%), Gaps = 2/86 (2%)
Frame = +3
Query: 456 PXPXXHXXA--PPPXKXXAXTXRKAGPXXXXPPXAPXXPXXXDXXAVSXXXPPXXXX*TX 629
P P H PPP K K P PP P PP
Sbjct: 77 PPPYEHPPVKYPPPIKTYPHPPVKYPPPEQYPPPIKKYPPPEQYPPPIKKYPPPEQYSPP 136
Query: 630 XXXXPPPXXRXXAXXXXPXPHXXPXP 707
PPP P P P P
Sbjct: 137 FKKYPPPEQYPPPIKKYPPPEHYPPP 162
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 28.7 bits (61), Expect = 8.1
Identities = 34/153 (22%), Positives = 38/153 (24%), Gaps = 4/153 (2%)
Frame = +3
Query: 456 PXPXXHXXAPPPXKXXAXTXRKAGPXXXXPPXAPXXPXXXDXXAVSXXXPP-XXXX*TXX 632
P P PPP + + R P PP +P P S PP
Sbjct: 505 PPPEYEPSPPPPSSEMSPSVRAYPP---PPPLSPPPPSPPPPYIYSSPPPPSPSPPPPYI 561
Query: 633 XXXPPPXXRXXAXXXXPXP---HXXPXPXXXXXXXXXTXNXXXSAXXXXPTXXXXXPPTK 803
PPP P P P P S+ PP
Sbjct: 562 YSSPPPVVNCPPTTQSPPPPKYEQTPSPREYYPSPSPPYYQYTSSPPPPTYYATQSPPPP 621
Query: 804 PSXXRHPXRXXXXXRXPPAQXVXAXPXXAXPPP 902
P P PP V P A PPP
Sbjct: 622 P-----PPTYYAVQSPPPPPPVYYPPVTASPPP 649
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 28.7 bits (61), Expect = 8.1
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 3/45 (6%)
Frame = +1
Query: 481 PPPPRXTXPXPYV---KXALXXPXPPXPXXXXQXXTXGPSPXTXP 606
PPPP P P V K P PP P P P T P
Sbjct: 454 PPPPPPPPPPPAVMPLKHFAPPPPPPLPPAVMPLKHFAPPPPTPP 498
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,448,508
Number of Sequences: 28952
Number of extensions: 177891
Number of successful extensions: 1133
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 12,070,560
effective HSP length: 83
effective length of database: 9,667,544
effective search space used: 3112949168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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