Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_J12
         (873 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0E621 Cluster: Chromosome undetermined scaffold_8, who...    36   1.3  
UniRef50_Q8TN13 Cluster: Peptide ABC transporter, permease prote...    35   3.1  
UniRef50_Q7RST9 Cluster: Riboflavin kinase / FAD synthetase, put...    34   4.1  
UniRef50_A5KAE8 Cluster: Serine/threonine protein kinase, putati...    34   4.1  
UniRef50_P20951 Cluster: RNA replication protein (176 kDa protei...    34   5.4  
UniRef50_Q98QE4 Cluster: Putative uncharacterized protein MYPU_4...    33   7.2  
UniRef50_A7TG13 Cluster: Putative uncharacterized protein; n=1; ...    33   9.5  

>UniRef50_A0E621 Cluster: Chromosome undetermined scaffold_8, whole
            genome shotgun sequence; n=3; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_8, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 1689

 Score = 35.9 bits (79), Expect = 1.3
 Identities = 19/42 (45%), Positives = 25/42 (59%)
 Frame = -1

Query: 282  IVNSYSIIDKQKIVSSAQNLINSESNIKNYERIPYDWRNVGL 157
            I  + SIID  KI S+  NLI +  N+K+Y     D+ NVGL
Sbjct: 1142 IATNNSIIDFIKITSTTPNLILTVINVKDYSSFKNDYFNVGL 1183


>UniRef50_Q8TN13 Cluster: Peptide ABC transporter, permease protein;
           n=1; Methanosarcina acetivorans|Rep: Peptide ABC
           transporter, permease protein - Methanosarcina
           acetivorans
          Length = 317

 Score = 34.7 bits (76), Expect = 3.1
 Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
 Frame = +1

Query: 118 IYGERVSLSVGFGQPYISPIVGYSFVIFDIAFR--INKILSG-TDNFLFI 258
           IYG RVSL++GF    IS I+G +  +F   FR    ++L G TD FL I
Sbjct: 110 IYGTRVSLTIGFLAGIISIIIGVTVGVFAGYFRGWTEELLMGVTDVFLLI 159


>UniRef50_Q7RST9 Cluster: Riboflavin kinase / FAD synthetase,
           putative; n=2; Plasmodium (Vinckeia)|Rep: Riboflavin
           kinase / FAD synthetase, putative - Plasmodium yoelii
           yoelii
          Length = 710

 Score = 34.3 bits (75), Expect = 4.1
 Identities = 21/83 (25%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
 Frame = -1

Query: 306 NLKYFFK*IVNSYS-IIDKQKIVSSA--QNLINSESNIKNYERIPYDWRNVGL-SKTDT* 139
           NL  F   ++N Y  +I+ +++ SS+   N+ N++SN KN+     +  N+G+ S+T+  
Sbjct: 74  NLFDFLYDVINKYHYLINNERVASSSCKTNVENNKSNSKNFSDNKIEQANIGIVSETNQV 133

Query: 138 TNTFAVNSLXRDTHAIVVDTETI 70
            ++ A+N   +  ++++ +T  +
Sbjct: 134 ESSNAINKNVQKKNSLLENTSNL 156


>UniRef50_A5KAE8 Cluster: Serine/threonine protein kinase, putative;
            n=1; Plasmodium vivax|Rep: Serine/threonine protein
            kinase, putative - Plasmodium vivax
          Length = 1415

 Score = 34.3 bits (75), Expect = 4.1
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
 Frame = +1

Query: 520  KCNL---NRFDSLQLIT--VTKNQKSTINCNSVYTLVF*LEKNLDFTVDRLKKISCSFSN 684
            +CN+   + F+SL L    +T+  K  I+ N V    F  E  LDF   R KK++   +N
Sbjct: 1148 ECNIPPKSMFNSLTLFNDILTERLKCNISGNIVIVSEFFSEDILDFIDRRQKKLNMKINN 1207

Query: 685  YCKPFVLYFYL*LMXR 732
              K ++LY  L L+ R
Sbjct: 1208 NEKSYILYQCLKLLIR 1223


>UniRef50_P20951 Cluster: RNA replication protein (176 kDa protein)
           (ORF 1 protein) [Includes: RNA-directed RNA polymerase
           (EC 2.7.7.48); Helicase (EC 3.6.1.-)]; n=3;
           Potexvirus|Rep: RNA replication protein (176 kDa
           protein) (ORF 1 protein) [Includes: RNA-directed RNA
           polymerase (EC 2.7.7.48); Helicase (EC 3.6.1.-)] -
           Papaya mosaic potexvirus (PMV)
          Length = 1547

 Score = 33.9 bits (74), Expect = 5.4
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +1

Query: 49  PSGHKLLYGLCVNHDSMCVTX**IYGERVSLSVGFGQPYISPI 177
           P GH++L    +NH   C+T       + S+++GFG  Y+SP+
Sbjct: 625 PKGHQVL---TINHSGECLTQIACQKGKASITMGFGDYYLSPV 664


>UniRef50_Q98QE4 Cluster: Putative uncharacterized protein
           MYPU_4220; n=1; Mycoplasma pulmonis|Rep: Putative
           uncharacterized protein MYPU_4220 - Mycoplasma pulmonis
          Length = 572

 Score = 33.5 bits (73), Expect = 7.2
 Identities = 19/65 (29%), Positives = 31/65 (47%)
 Frame = +1

Query: 499 SLRFIEPKCNLNRFDSLQLITVTKNQKSTINCNSVYTLVF*LEKNLDFTVDRLKKISCSF 678
           S+RFI PK N+   +   L +    +++      +Y  V+   K  D++VD L + S SF
Sbjct: 347 SIRFIRPKKNITLMEGFILSSANSKEENKKILQVIYDAVY---KGADYSVDELVEHSASF 403

Query: 679 SNYCK 693
               K
Sbjct: 404 KKVTK 408


>UniRef50_A7TG13 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 565

 Score = 33.1 bits (72), Expect = 9.5
 Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
 Frame = -1

Query: 264 IIDKQKIVSSAQNLINSESNIKNYERIPY--DWRNVGLSKTDT*TNTFAVNSLXRDTHAI 91
           I DK  +VS A  L++S +    Y R+PY  DWRNV L      T  +   S     H  
Sbjct: 189 ITDKNTVVSLA--LMSSNA----YVRLPYTDDWRNVSLPWDSNDTPGYGWESNGIRGHVF 242

Query: 90  VVDTETI*KLVARGLXS*GCP 28
           V D E I  +  +G  + G P
Sbjct: 243 VNDLENIVVISIKGTSAQGLP 263


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 608,528,794
Number of Sequences: 1657284
Number of extensions: 9922420
Number of successful extensions: 20101
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20099
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77882636090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)