Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_J11
         (898 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK055595-1|BAB70966.1|  729|Homo sapiens protein ( Homo sapiens ...    32   3.2  
AF007191-1|AAC02269.1|  589|Homo sapiens intestinal mucin protein.     31   5.7  
BX537728-1|CAD97821.1|  609|Homo sapiens hypothetical protein pr...    31   7.5  
AB095938-1|BAC23114.1| 1685|Homo sapiens KIAA2018 protein protein.     31   7.5  

>AK055595-1|BAB70966.1|  729|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31033 fis, clone HSYRA1000168, weakly similar to
           HYPOTHETICAL HELICASE C28H8.3 IN CHROMOSOME III. ).
          Length = 729

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +1

Query: 496 VTPKTKPARKSPGKFTPVLENNRVYFKIMSTEDKQYLKLDNTKGSSDDRIIY 651
           VT  T+P   S G    +L+N + +     ++ K +LK D  K   +D +++
Sbjct: 103 VTQTTRPKEDSSGASGEILQNTKPHQITKKSKKKSFLKEDQNKAQQNDDLLF 154


>AF007191-1|AAC02269.1|  589|Homo sapiens intestinal mucin protein.
          Length = 589

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 18/60 (30%), Positives = 31/60 (51%)
 Frame = +2

Query: 524 SLLGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTLSPS 703
           S+  ++ P    T  T+ + PP T +  +S++ K+L  T   +  A +  S TT T+ PS
Sbjct: 5   SITSAITPTNTVTSMTTMTSPPTTTNCFTSLSSKILSSTPVPSTEAII--SGTTNTIPPS 62


>BX537728-1|CAD97821.1|  609|Homo sapiens hypothetical protein
           protein.
          Length = 609

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +2

Query: 251 SEGKEGRGYQGSREASDRKRQEEHHGLRLPVMDKGWKGNRQILLPHPV*SDLHRADCQAH 430
           SE + G   QGSR  SD+     +  L +P        N Q  + H V SD+  +DCQ  
Sbjct: 45  SEQRMGISIQGSR-VSDQLEMRSY--LDVPRNKSLAIHNMQGRVDHTVASDIRLSDCQTF 101

Query: 431 KQKGPS-RPQVDRPTKPQQN 487
           K  G S +PQ +   +  +N
Sbjct: 102 KPSGASQQPQSNFEVQSSRN 121


>AB095938-1|BAC23114.1| 1685|Homo sapiens KIAA2018 protein protein.
          Length = 1685

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +2

Query: 251  SEGKEGRGYQGSREASDRKRQEEHHGLRLPVMDKGWKGNRQILLPHPV*SDLHRADCQAH 430
            SE + G   QGSR  SD+     +  L +P        N Q  + H V SD+  +DCQ  
Sbjct: 1121 SEQRMGISIQGSR-VSDQLEMRSY--LDVPRNKSLAIHNMQGRVDHTVASDIRLSDCQTF 1177

Query: 431  KQKGPS-RPQVDRPTKPQQN 487
            K  G S +PQ +   +  +N
Sbjct: 1178 KPSGASQQPQSNFEVQSSRN 1197


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,658,618
Number of Sequences: 237096
Number of extensions: 2723064
Number of successful extensions: 6726
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6725
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)