Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_J11
(898 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical pr... 33 0.21
AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical... 32 0.64
Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL033508-3|CAA22054.1| 315|Caenorhabditis elegans Hypothetical ... 31 1.1
AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical... 31 1.1
Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical pr... 30 2.0
DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated... 30 2.0
Z93378-4|CAE17803.1| 514|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical pr... 29 3.4
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z69384-6|CAA93414.3| 499|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 29 4.5
Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical pr... 28 7.9
U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fb... 28 7.9
AC084197-15|AAN63425.1| 391|Caenorhabditis elegans Hypothetical... 28 7.9
AC084197-14|AAM44396.1| 526|Caenorhabditis elegans Hypothetical... 28 7.9
AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical... 28 7.9
>Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical
protein F15A4.8b protein.
Length = 808
Score = 33.5 bits (73), Expect = 0.21
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 536 SLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTT 685
++P TT S + PP ++T + +T+ V ST IAP+T +TT
Sbjct: 421 AIPDVTSTTTTKSSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVTMPSTT 470
>AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical
protein Y71H2B.1 protein.
Length = 143
Score = 31.9 bits (69), Expect = 0.64
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 192 LYMSVVIGEYETAIA-KCSEYLKEKKGEVIKEAVKRLIE 305
LYM +G+Y+ A KC +Y K+ G+ EA++ I+
Sbjct: 87 LYMQATVGDYDGNTALKCGQYWKKHSGKTQIEAIREYIK 125
>Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical
protein C08H9.11 protein.
Length = 459
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +3
Query: 246 EYLKEKKGEVIKEA-VKRLIENGKRNTMDFAYQLWTKDGKEIVKSY--FPIQFRVIFTEQ 416
EY + E + VK ++ K+N +D WT+ E +KSY F + R FTE
Sbjct: 187 EYSRLVSNETSRNVFVKSIVSFFKKNDIDGIEIFWTRPKYEDIKSYSSFIQELRSAFTE- 245
Query: 417 TVKLINKRDHHALKLI 464
K N+++ + + LI
Sbjct: 246 LQKRWNRKNEYIISLI 261
>AL033508-3|CAA22054.1| 315|Caenorhabditis elegans Hypothetical
protein Y106G6G.4 protein.
Length = 315
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 569 TSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTLSPSMYESDV 721
TS PP TNS+ S++ V+ ++S+ + L + T TL+ S +S V
Sbjct: 223 TSTDPPPTTNSSNSTVESVTSVIPINSSTVPVLNTTLQTSTLAESSSQSVV 273
>AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical
protein Y41C4A.11 protein.
Length = 386
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -2
Query: 669 VSGAITVDDTVITRTFRVIELQVLFVLGGHDLEVNSVVFQHGGKLPRRL-SCWFCLWSHR 493
VSG++ D T+ + +++ E + + L GH+ VN V F GG++ C C+W +
Sbjct: 251 VSGSL--DKTL--KVWKLGEQESICTLEGHEKGVNCVEFLTGGRIVSGSDDCSICVWDIQ 306
Query: 492 MQFC 481
Q C
Sbjct: 307 TQKC 310
>Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical
protein C45B11.1a protein.
Length = 522
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -1
Query: 283 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTAR 122
++I P SFRY+ L ++ SPM ++ S S S+ V + ++ H+ R
Sbjct: 76 TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFR 129
>DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated
kinase PAK-2 protein.
Length = 522
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -1
Query: 283 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTAR 122
++I P SFRY+ L ++ SPM ++ S S S+ V + ++ H+ R
Sbjct: 76 TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFR 129
>Z93378-4|CAE17803.1| 514|Caenorhabditis elegans Hypothetical
protein F19H8.5 protein.
Length = 514
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 641 VSSTVIAPLTPSNTTGTLSPSMY 709
+ S IAPL PSN+ G LSPS++
Sbjct: 159 ILSPRIAPLMPSNSKGLLSPSIF 181
>Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical
protein F15A4.8a protein.
Length = 755
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2
Query: 557 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTT 685
TTE S + PP ++T + +T+ V ST IAP+T +TT
Sbjct: 393 TTE--SSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVTMPSTT 433
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 554 KTTEFTSRSCP-PRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGT 691
KTT FT+ P P T ST +S T V + S+T TP T T
Sbjct: 434 KTTIFTTTPVPCPTTTSTTTSATTLVPTTSSSTTTTTTTTPVPVTST 480
>Z69384-6|CAA93414.3| 499|Caenorhabditis elegans Hypothetical
protein T11G6.4 protein.
Length = 499
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 541 TPVL-ENNRVYFKIMSTEDKQYLKLDNTKGS-SDDRIIYGDSTADTFKHH 684
TPVL + R K+ + EDK L D+ S S+D ++ D T KHH
Sbjct: 444 TPVLIKEKRKRHKLKAREDKALLNSDSDSNSDSEDDLLLNDQTTRR-KHH 492
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -3
Query: 278 DNLSLLFLQIFRAFGDSGLVFTNDDTHIQLLRQYVISSWCKCGVRSQRTHGEDEG 114
DN + + Q FR+ G S + + + ISSW +C + GEDEG
Sbjct: 795 DNFTCMCAQGFRSEGRSCVSECKPNDFVCTKTYKCISSWWRCDGQDDCGDGEDEG 849
>Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical
protein K11H3.3 protein.
Length = 312
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 270 EVIKEAVKRLIENGKRNTMDFAYQLWTKDG 359
+V+K ++ L +NT+D A Q+W K+G
Sbjct: 242 DVVKTRMQGLEAKKYKNTLDCAMQIWKKEG 271
>U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fbf)
domain-containingprotein 9 protein.
Length = 703
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 186 EQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKE 365
E+ Y ++GE E + KC +K++ G ++++IE + + F +TK+ +
Sbjct: 440 EEKYQHEILGEMEGQVLKC---VKDQNG---NHVIQKVIERVEPERLQFIIDAFTKNNSD 493
Query: 366 IV--KSYFPIQFRVI 404
V S P RVI
Sbjct: 494 NVYTLSVHPYGCRVI 508
>AC084197-15|AAN63425.1| 391|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5c protein.
Length = 391
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 432 NKRDHHALKLIDQQNHNKIAFGDSKDKTSKKVSWEVYPRVGKQQSLLQDH 581
+KR H A I + + +FGD +++ + + VG Q+ LQDH
Sbjct: 292 SKRSHEAAARIRAPSPPRRSFGDRGNRSDEHHGGSRHMDVGPQRRRLQDH 341
>AC084197-14|AAM44396.1| 526|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5b protein.
Length = 526
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 432 NKRDHHALKLIDQQNHNKIAFGDSKDKTSKKVSWEVYPRVGKQQSLLQDH 581
+KR H A I + + +FGD +++ + + VG Q+ LQDH
Sbjct: 427 SKRSHEAAARIRAPSPPRRSFGDRGNRSDEHHGGSRHMDVGPQRRRLQDH 476
>AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5a protein.
Length = 571
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 432 NKRDHHALKLIDQQNHNKIAFGDSKDKTSKKVSWEVYPRVGKQQSLLQDH 581
+KR H A I + + +FGD +++ + + VG Q+ LQDH
Sbjct: 472 SKRSHEAAARIRAPSPPRRSFGDRGNRSDEHHGGSRHMDVGPQRRRLQDH 521
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,647,176
Number of Sequences: 27780
Number of extensions: 410808
Number of successful extensions: 1472
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1472
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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