Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_J10
(858 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC027241-1|AAH27241.1| 505|Homo sapiens ALDH1L1 protein protein. 40 0.015
AF052732-1|AAC35000.1| 902|Homo sapiens 10-formyltetrahydrofola... 40 0.015
AB209299-1|BAD92536.1| 954|Homo sapiens aldehyde dehydrogenase ... 40 0.015
AK222694-1|BAD96414.1| 902|Homo sapiens formyltetrahydrofolate ... 39 0.020
AK222535-1|BAD96255.1| 902|Homo sapiens formyltetrahydrofolate ... 39 0.027
BC045645-1|AAH45645.1| 267|Homo sapiens ALDH1L1 protein protein. 34 0.58
BC103935-1|AAI03936.1| 488|Homo sapiens ALDH1L2 protein protein. 31 4.1
BC103934-1|AAI03935.1| 923|Homo sapiens aldehyde dehydrogenase ... 31 4.1
AK095827-1|BAC04634.1| 752|Homo sapiens protein ( Homo sapiens ... 31 4.1
>BC027241-1|AAH27241.1| 505|Homo sapiens ALDH1L1 protein protein.
Length = 505
Score = 39.5 bits (88), Expect = 0.015
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 137 EGDKLYITGLNKPAVVHEAGLLVTAK*WS*AQHTEAK-SNGKMINAQNFFKASEEKISIE 313
EGD L I G ++P VV +AGL++ + +GKMI A NFFK + + +E
Sbjct: 257 EGDALPIPGAHRPGVVTKAGLILFGNDDKMLLVKNIQLEDGKMILASNFFKGAASSV-LE 315
Query: 314 LNSDELKFVESCR 352
L EL E+ R
Sbjct: 316 LTEAELVTAEAVR 328
Score = 34.3 bits (75), Expect = 0.58
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 696 TDESVICKCK-CXAQ*R*XAVRAAXKAFDEGXWSKISARER 815
TD SVIC+ AV AA AF+ G W KISAR+R
Sbjct: 445 TDGSVICQVSLAQVTDVDKAVAAAKDAFENGRWGKISARDR 485
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 475 VELXNEDVYLNTTFXEFYSVXVLKAXG 555
+EL NEDVY+ +TF +F + V K G
Sbjct: 371 LELENEDVYMASTFGDFIQLLVRKLRG 397
>AF052732-1|AAC35000.1| 902|Homo sapiens 10-formyltetrahydrofolate
dehydrogenase protein.
Length = 902
Score = 39.5 bits (88), Expect = 0.015
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 137 EGDKLYITGLNKPAVVHEAGLLVTAK*WS*AQHTEAK-SNGKMINAQNFFKASEEKISIE 313
EGD L I G ++P VV +AGL++ + +GKMI A NFFK + + +E
Sbjct: 257 EGDALPIPGAHRPGVVTKAGLILFGNDDKMLLVKNIQLEDGKMILASNFFKGAASSV-LE 315
Query: 314 LNSDELKFVESCR 352
L EL E+ R
Sbjct: 316 LTEAELVTAEAVR 328
Score = 33.9 bits (74), Expect = 0.76
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 696 TDESVICKCK-CXAQ*R*XAVRAAXKAFDEGXWSKISARER 815
TD SVIC+ AV AA AF+ G W KISAR+R
Sbjct: 445 TDGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDR 485
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 475 VELXNEDVYLNTTFXEFYSVXVLKAXG 555
+EL NEDVY+ +TF +F + V K G
Sbjct: 371 LELENEDVYMASTFGDFIQLLVRKLRG 397
>AB209299-1|BAD92536.1| 954|Homo sapiens aldehyde dehydrogenase 1
family, member L1 variant protein.
Length = 954
Score = 39.5 bits (88), Expect = 0.015
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 137 EGDKLYITGLNKPAVVHEAGLLVTAK*WS*AQHTEAK-SNGKMINAQNFFKASEEKISIE 313
EGD L I G ++P VV +AGL++ + +GKMI A NFFK + + +E
Sbjct: 309 EGDALPIPGAHRPGVVTKAGLILFGNDDKMLLVKNIQLEDGKMILASNFFKGAASSV-LE 367
Query: 314 LNSDELKFVESCR 352
L EL E+ R
Sbjct: 368 LTEAELVTAEAVR 380
Score = 34.3 bits (75), Expect = 0.58
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 696 TDESVICKCK-CXAQ*R*XAVRAAXKAFDEGXWSKISARER 815
TD SVIC+ AV AA AF+ G W KISAR+R
Sbjct: 497 TDGSVICQVSLAQVTDVDKAVAAAKDAFENGRWGKISARDR 537
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 475 VELXNEDVYLNTTFXEFYSVXVLKAXG 555
+EL NEDVY+ +TF +F + V K G
Sbjct: 423 LELENEDVYMASTFGDFIQLLVRKLRG 449
>AK222694-1|BAD96414.1| 902|Homo sapiens formyltetrahydrofolate
dehydrogenase isoform a variant protein.
Length = 902
Score = 39.1 bits (87), Expect = 0.020
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 137 EGDKLYITGLNKPAVVHEAGLLVTAK*WS*AQHTEAK-SNGKMINAQNFFKASEEKISIE 313
EGD L I G ++P VV +AGL++ + +GKMI A NFFK + + +E
Sbjct: 257 EGDALPIPGAHRPGVVTKAGLILFGNDDRMLLVKNIQLEDGKMILASNFFKGAASSV-LE 315
Query: 314 LNSDELKFVESCR 352
L EL E+ R
Sbjct: 316 LTEAELVTAEAVR 328
Score = 34.3 bits (75), Expect = 0.58
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 696 TDESVICKCK-CXAQ*R*XAVRAAXKAFDEGXWSKISARER 815
TD SVIC+ AV AA AF+ G W KISAR+R
Sbjct: 445 TDGSVICQVSLAQVTDVDKAVAAAKDAFENGRWGKISARDR 485
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 475 VELXNEDVYLNTTFXEFYSVXVLKAXG 555
+EL NEDVY+ +TF +F + V K G
Sbjct: 371 LELENEDVYMASTFGDFIQLLVRKLRG 397
>AK222535-1|BAD96255.1| 902|Homo sapiens formyltetrahydrofolate
dehydrogenase isoform a variant protein.
Length = 902
Score = 38.7 bits (86), Expect = 0.027
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 137 EGDKLYITGLNKPAVVHEAGLLVTAK*WS*AQHTEAK-SNGKMINAQNFFKASEEKISIE 313
EGD L I G ++P VV +AGL++ + +GKMI A NFFK + + +E
Sbjct: 257 EGDALPIPGAHRPGVVTKAGLILFGNDDKMLLVKNIQLEDGKMILASNFFKGAASGV-LE 315
Query: 314 LNSDELKFVESCR 352
L EL E+ R
Sbjct: 316 LTEAELVTAEAVR 328
Score = 32.7 bits (71), Expect = 1.8
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 696 TDESVICKCK-CXAQ*R*XAVRAAXKAFDEGXWSKISARER 815
TD SVIC+ AV AA AF+ G W KI AR+R
Sbjct: 445 TDGSVICQVSLAQVTDVDKAVAAAKDAFENGRWGKIGARDR 485
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 475 VELXNEDVYLNTTFXEFYSVXVLKAXG 555
+EL NEDVY+ +TF +F + V K G
Sbjct: 371 LELENEDVYMASTFGDFIQLLVRKLRG 397
>BC045645-1|AAH45645.1| 267|Homo sapiens ALDH1L1 protein protein.
Length = 267
Score = 34.3 bits (75), Expect = 0.58
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 696 TDESVICKCK-CXAQ*R*XAVRAAXKAFDEGXWSKISARER 815
TD SVIC+ AV AA AF+ G W KISAR+R
Sbjct: 147 TDGSVICQVSLAQVTDVDKAVAAAKDAFENGRWGKISARDR 187
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 475 VELXNEDVYLNTTFXEFYSVXVLKAXG 555
+EL NEDVY+ +TF +F + V K G
Sbjct: 73 LELENEDVYMASTFGDFIQLLVRKLRG 99
>BC103935-1|AAI03936.1| 488|Homo sapiens ALDH1L2 protein protein.
Length = 488
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 696 TDESVICKCKCXAQ*R*X-AVRAAXKAFDEGXWSKISARER 815
TD S ICK + AV AA AF+ G W +++ARER
Sbjct: 204 TDGSTICKVSYASLADVDKAVAAAKDAFENGEWGRMNARER 244
>BC103934-1|AAI03935.1| 923|Homo sapiens aldehyde dehydrogenase 1
family, member L2 protein.
Length = 923
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 696 TDESVICKCKCXAQ*R*X-AVRAAXKAFDEGXWSKISARER 815
TD S ICK + AV AA AF+ G W +++ARER
Sbjct: 466 TDGSTICKVSYASLADVDKAVAAAKDAFENGEWGRMNARER 506
>AK095827-1|BAC04634.1| 752|Homo sapiens protein ( Homo sapiens
cDNA FLJ38508 fis, clone HCHON2000322, moderately
similar to 10-FORMYLTETRAHYDROFOLATE DEHYDROGENASE (EC
1.5.1.6). ).
Length = 752
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 696 TDESVICKCKCXAQ*R*X-AVRAAXKAFDEGXWSKISARER 815
TD S ICK + AV AA AF+ G W +++ARER
Sbjct: 466 TDGSTICKVSYASLADVDKAVAAAKDAFENGEWGRMNARER 506
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,310,455
Number of Sequences: 237096
Number of extensions: 1687195
Number of successful extensions: 2812
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2804
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -