Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_J10
         (858 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011186-1|AAR88547.1|  913|Drosophila melanogaster RE12154p pro...    37   0.041
AE014134-3395|AAF53994.3|  913|Drosophila melanogaster CG8665-PA...    36   0.094
Z50021-1|CAA90324.1| 1096|Drosophila melanogaster centrosome-ass...    29   8.2  
BT010090-1|AAQ22559.1| 1096|Drosophila melanogaster LD02352p pro...    29   8.2  
AE014297-1986|AAN13643.1| 1096|Drosophila melanogaster CG6384-PB...    29   8.2  
AE014297-1985|AAF55159.1| 1096|Drosophila melanogaster CG6384-PA...    29   8.2  

>BT011186-1|AAR88547.1|  913|Drosophila melanogaster RE12154p
           protein.
          Length = 913

 Score = 36.7 bits (81), Expect = 0.041
 Identities = 29/98 (29%), Positives = 42/98 (42%)
 Frame = +3

Query: 159 QALINQPWYTKPAYLLLPNDGVRLNIQRLKVTGR*STLKTSSKLARRRSL*N*IXXXXXX 338
           + L    W      L+   DG  +NI+R+K   R  +     K A  +S+ +        
Sbjct: 275 RGLTKTAWIHSGGLLIEGTDGAFVNIRRIKRGTRVISASEWFKQAEDQSITDFSEDELVK 334

Query: 339 XXXXXXXXXXILRIEIENHTDXLRIGGPGSMDVVRLVE 452
                     IL+ ++E+ TD     G GSMDVVRLVE
Sbjct: 335 RSLLAGIWKAILKEDVESSTDFFA-SGAGSMDVVRLVE 371


>AE014134-3395|AAF53994.3|  913|Drosophila melanogaster CG8665-PA
           protein.
          Length = 913

 Score = 35.5 bits (78), Expect = 0.094
 Identities = 28/98 (28%), Positives = 42/98 (42%)
 Frame = +3

Query: 159 QALINQPWYTKPAYLLLPNDGVRLNIQRLKVTGR*STLKTSSKLARRRSL*N*IXXXXXX 338
           + L    W      L+   DG  +NI+R+K   +  +     K A  +S+ +        
Sbjct: 275 RGLTKTAWIHSGGLLIEGTDGAFVNIRRIKRGTKVISASEWFKQAEDQSITDFSEDELVK 334

Query: 339 XXXXXXXXXXILRIEIENHTDXLRIGGPGSMDVVRLVE 452
                     IL+ ++E+ TD     G GSMDVVRLVE
Sbjct: 335 RSLLAGIWKAILKEDVESSTDFFA-SGAGSMDVVRLVE 371


>Z50021-1|CAA90324.1| 1096|Drosophila melanogaster
           centrosome-associated zinc fingerprotein protein.
          Length = 1096

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -2

Query: 380 NAKNRPPHPRGSSRQTLARPNSVL 309
           N + RPP P+G  R+T+ +P+S L
Sbjct: 130 NRQQRPPSPKGIRRRTVGQPSSGL 153


>BT010090-1|AAQ22559.1| 1096|Drosophila melanogaster LD02352p
           protein.
          Length = 1096

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -2

Query: 380 NAKNRPPHPRGSSRQTLARPNSVL 309
           N + RPP P+G  R+T+ +P+S L
Sbjct: 130 NRQQRPPSPKGIRRRTVGQPSSGL 153


>AE014297-1986|AAN13643.1| 1096|Drosophila melanogaster CG6384-PB,
           isoform B protein.
          Length = 1096

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -2

Query: 380 NAKNRPPHPRGSSRQTLARPNSVL 309
           N + RPP P+G  R+T+ +P+S L
Sbjct: 130 NRQQRPPSPKGIRRRTVGQPSSGL 153


>AE014297-1985|AAF55159.1| 1096|Drosophila melanogaster CG6384-PA,
           isoform A protein.
          Length = 1096

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -2

Query: 380 NAKNRPPHPRGSSRQTLARPNSVL 309
           N + RPP P+G  R+T+ +P+S L
Sbjct: 130 NRQQRPPSPKGIRRRTVGQPSSGL 153


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,359,283
Number of Sequences: 53049
Number of extensions: 506176
Number of successful extensions: 967
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4126982652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)