Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_J06
         (875 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-3259|AAG22448.2|  300|Drosophila melanogaster CG18810-P...    32   1.2  
BT022388-1|AAY54804.1|  364|Drosophila melanogaster IP11532p pro...    29   6.4  
AE014134-2521|AAF53409.1|  364|Drosophila melanogaster CG4697-PA...    29   6.4  

>AE014134-3259|AAG22448.2|  300|Drosophila melanogaster CG18810-PA
           protein.
          Length = 300

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +2

Query: 647 HYMFYSNGCLRNSDFRFFF-FCVYLYLIFSLGYLTKPVFI 763
           H+ F++  C+ + ++R+FF F +Y +L   +   +  +FI
Sbjct: 125 HHCFFTGCCIGHENYRYFFYFLIYFFLSCMISLTSSSIFI 164


>BT022388-1|AAY54804.1|  364|Drosophila melanogaster IP11532p
           protein.
          Length = 364

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -1

Query: 668 HSNKTYNVKLKDELYKNI 615
           H   TYNVKL DELYK +
Sbjct: 48  HVKTTYNVKLYDELYKTL 65


>AE014134-2521|AAF53409.1|  364|Drosophila melanogaster CG4697-PA
           protein.
          Length = 364

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -1

Query: 668 HSNKTYNVKLKDELYKNI 615
           H   TYNVKL DELYK +
Sbjct: 48  HVKTTYNVKLYDELYKTL 65


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,159,190
Number of Sequences: 53049
Number of extensions: 501364
Number of successful extensions: 1316
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1315
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)