Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_J05
         (885 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    25   2.3  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   4.1  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     24   7.1  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   9.4  

>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = -2

Query: 854 TPKRNVXXXXXTLPXYPPGHAVXPRGSTVLDSVKA 750
           TP+RN      T P Y P   V   G+ V D VKA
Sbjct: 257 TPERNPKEGDYTAPIYEPTERVV--GNNVDDKVKA 289


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +3

Query: 459 DVQGDDGRPAYGDGXDKTSPRVSWKLIALWENNKVYFKILNTERNQYLVLGVG 617
           D  GD GRPAY    D +  +V        +  ++Y   L TE ++ L+ G G
Sbjct: 101 DRNGDGGRPAYSGNSDPSMDQVKTD-----KPRELYIPPLPTE-DESLIFGSG 147


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 15/62 (24%), Positives = 27/62 (43%)
 Frame = +1

Query: 160 NDILEEQLYNSVVVADYDSAVEKSKHLYEEKKSEVITNVVNKLIRNNKMNCMEYAYQLWL 339
           +D  +EQ Y    + D  +   + +   +E K E  TNV +  I  ++    + +   W 
Sbjct: 565 DDESKEQTYGDPKIEDNPTESVEIEWSLDETKREAKTNVADDTISESEFYGWDCSDDGWP 624

Query: 340 QG 345
           QG
Sbjct: 625 QG 626


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 533 LPADSRACLVLAVAVGRSAIVALNIIAQ 450
           LP DS   L L V +  S  V LN++A+
Sbjct: 255 LPPDSGEKLTLGVTILLSLTVFLNLVAE 282


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 764,112
Number of Sequences: 2352
Number of extensions: 14007
Number of successful extensions: 60
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95093730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)