Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_J05
         (885 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069830-1|AAL39975.1| 1218|Drosophila melanogaster SD07723p pro...    29   8.5  
AY069739-1|AAL39884.1|  523|Drosophila melanogaster LP05865p pro...    29   8.5  
AY061583-1|AAL29131.1|  842|Drosophila melanogaster SD03196p pro...    29   8.5  
AE014296-3538|AAF51724.2|  523|Drosophila melanogaster CG5656-PA...    29   8.5  
AE013599-1765|AAF58335.2| 1218|Drosophila melanogaster CG12295-P...    29   8.5  

>AY069830-1|AAL39975.1| 1218|Drosophila melanogaster SD07723p protein.
          Length = 1218

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
 Frame = +1

Query: 166  ILEEQLYNSVVVADYDSAVEKSKHLYEEKKSEVITNVVNKLIRNNKM---NCMEYAYQL- 333
            +LEE +Y  V V DY +   +SK+  +   S ++ + +  L+R  K      + Y  QL 
Sbjct: 974  LLEENVYRQVTVYDYQAVCFESKN--DNNASSMLLSPLFHLLRVGKWLLHTALWYIVQLL 1031

Query: 334  -WLQGLQGH 357
             W  G+  H
Sbjct: 1032 QWAPGVSSH 1040


>AY069739-1|AAL39884.1|  523|Drosophila melanogaster LP05865p
           protein.
          Length = 523

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = -2

Query: 422 HKLNRVFGEDKSELXLGNNPGRCP 351
           H  NR F  D     LG NPG CP
Sbjct: 195 HTSNRDFESDYDVTKLGQNPGNCP 218


>AY061583-1|AAL29131.1|  842|Drosophila melanogaster SD03196p
           protein.
          Length = 842

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
 Frame = +1

Query: 166 ILEEQLYNSVVVADYDSAVEKSKHLYEEKKSEVITNVVNKLIRNNKM---NCMEYAYQL- 333
           +LEE +Y  V V DY +   +SK+  +   S ++ + +  L+R  K      + Y  QL 
Sbjct: 598 LLEENVYRQVTVYDYQAVCFESKN--DNNASSMLLSPLFHLLRVGKWLLHTALWYIVQLL 655

Query: 334 -WLQGLQGH 357
            W  G+  H
Sbjct: 656 QWAPGVSSH 664


>AE014296-3538|AAF51724.2|  523|Drosophila melanogaster CG5656-PA
           protein.
          Length = 523

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = -2

Query: 422 HKLNRVFGEDKSELXLGNNPGRCP 351
           H  NR F  D     LG NPG CP
Sbjct: 195 HTSNRDFESDYDVTKLGQNPGNCP 218


>AE013599-1765|AAF58335.2| 1218|Drosophila melanogaster CG12295-PB
            protein.
          Length = 1218

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
 Frame = +1

Query: 166  ILEEQLYNSVVVADYDSAVEKSKHLYEEKKSEVITNVVNKLIRNNKM---NCMEYAYQL- 333
            +LEE +Y  V V DY +   +SK+  +   S ++ + +  L+R  K      + Y  QL 
Sbjct: 974  LLEENVYRQVTVYDYQAVCFESKN--DNNASSMLLSPLFHLLRVGKWLLHTALWYIVQLL 1031

Query: 334  -WLQGLQGH 357
             W  G+  H
Sbjct: 1032 QWAPGVSSH 1040


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,338,963
Number of Sequences: 53049
Number of extensions: 610207
Number of successful extensions: 1845
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1845
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)