Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_J04
         (876 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   3.1  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   3.1  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    21   9.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.6  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -1

Query: 597 LTSGNLNXARRRASMTCAFHLSL 529
           LTS  L    RR  +T AFH S+
Sbjct: 123 LTSTGLKWQTRRKILTPAFHFSI 145


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -1

Query: 597 LTSGNLNXARRRASMTCAFHLSL 529
           LTS  L    RR  +T AFH S+
Sbjct: 123 LTSTGLKWQTRRKILTPAFHFSI 145


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 13/43 (30%), Positives = 17/43 (39%)
 Frame = +1

Query: 241 LSTGACTWCPTNMKQLSSEALEAGRICCNKYLVKNCGKDQFHI 369
           L  G CT     +K    EAL      CN+ +  N  K   H+
Sbjct: 46  LDKGRCTPEGKKLKSTIPEALSTDCAKCNEKVKANVRKVLHHL 88


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 349 GKDQFHIRMRXHPFHVIRINKMLSCAG 429
           G D   I     P H +R+N ++S +G
Sbjct: 364 GHDLTLIATDGEPVHPVRVNTIISFSG 390


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 349 GKDQFHIRMRXHPFHVIRINKMLSCAG 429
           G D   I     P H +R+N ++S +G
Sbjct: 364 GHDLTLIATDGEPVHPVRVNTIISFSG 390


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,627
Number of Sequences: 336
Number of extensions: 3450
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)