Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_J03
(848 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 200 8e-52
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 122 4e-28
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 122 4e-28
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 105 4e-23
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 105 4e-23
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 105 4e-23
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 105 4e-23
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 105 4e-23
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 105 4e-23
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 104 7e-23
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 104 7e-23
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 104 9e-23
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 104 9e-23
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 94 1e-19
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 94 1e-19
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 79 5e-15
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 38 0.012
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 34 0.11
Z30423-1|CAA83003.1| 1681|Caenorhabditis elegans Hypothetical pr... 30 2.4
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 30 2.4
U00051-6|AAK70644.1| 259|Caenorhabditis elegans Hypothetical pr... 29 5.5
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 200 bits (489), Expect = 8e-52
Identities = 103/186 (55%), Positives = 132/186 (70%)
Frame = +3
Query: 243 ALGPQAMLKMLMDPMGGIVMTNDGNAILRXITVQHPAAKSMIEIARTQDEEVGDGTTSVI 422
+LGP+AMLKMLMDPMGGIVMTNDGNAILR ITV+HPAAKSMIEIARTQDEE GDGTTSVI
Sbjct: 42 SLGPRAMLKMLMDPMGGIVMTNDGNAILREITVKHPAAKSMIEIARTQDEETGDGTTSVI 101
Query: 423 VLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQDKISVPVDLNDRDKMKEVIRS 602
+LAGE++A A+ +L Q HPT+II+ YRQALED I ++K S VD+ D ++ +V++S
Sbjct: 102 ILAGEVMAHAQTYLEQKTHPTLIIKAYRQALEDMIQWSENKFSKTVDITDDAEIAKVVKS 161
Query: 603 CVGTKYIGRWADLXRRHCS*CG*YCYCE**WQN*G*H*KLCKSGXDPGGTVEESRVLSGV 782
C+GTK I +W DL E + C+ PGG +E+S+V+ G+
Sbjct: 162 CLGTKMISKWMDLAVNISIQAVKTIRVEKAGVREIDIKRYCRIEKIPGGRIEDSQVVKGI 221
Query: 783 MFNKDV 800
+ NKD+
Sbjct: 222 VVNKDI 227
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/45 (46%), Positives = 26/45 (57%)
Frame = +2
Query: 155 SQNXKRXSGRKVXLENXSAGKPIADVIXTCLGTSGHVKNVNGPYG 289
SQ KR SG +V + N +A K IADVI T LG +K + P G
Sbjct: 13 SQGTKRESGHQVQIGNINACKTIADVIRTSLGPRAMLKMLMDPMG 57
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 640 LXVDIALDAVNTVTVNDNGRIEVDIKNYAKVEXI 741
L V+I++ AV T+ V G E+DIK Y ++E I
Sbjct: 174 LAVNISIQAVKTIRVEKAGVREIDIKRYCRIEKI 207
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 785 VQQGCXHPKMXRYIENPRIIL 847
V + H KM R IENPRI+L
Sbjct: 223 VNKDILHAKMRRRIENPRIVL 243
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 122 bits (293), Expect = 4e-28
Identities = 56/132 (42%), Positives = 87/132 (65%)
Frame = +3
Query: 243 ALGPQAMLKMLMDPMGGIVMTNDGNAILRXITVQHPAAKSMIEIARTQDEEVGDGTTSVI 422
+LGP + KML+D +G +++TNDG IL+ + V+HPA K ++E+A+ QDEEVGDGTTSV+
Sbjct: 39 SLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVV 98
Query: 423 VLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQDKISVPVDLNDRDKMKEVIRS 602
++A E+L A+ + Q +HPT II YR A ++A+ + + IS D R + ++
Sbjct: 99 IVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENISFTSDSIGRQSVVNAAKT 158
Query: 603 CVGTKYIGRWAD 638
+ +K IG AD
Sbjct: 159 SMSSKIIGPDAD 170
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 122 bits (293), Expect = 4e-28
Identities = 56/132 (42%), Positives = 87/132 (65%)
Frame = +3
Query: 243 ALGPQAMLKMLMDPMGGIVMTNDGNAILRXITVQHPAAKSMIEIARTQDEEVGDGTTSVI 422
+LGP + KML+D +G +++TNDG IL+ + V+HPA K ++E+A+ QDEEVGDGTTSV+
Sbjct: 39 SLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVV 98
Query: 423 VLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQDKISVPVDLNDRDKMKEVIRS 602
++A E+L A+ + Q +HPT II YR A ++A+ + + IS D R + ++
Sbjct: 99 IVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENISFTSDSIGRQSVVNAAKT 158
Query: 603 CVGTKYIGRWAD 638
+ +K IG AD
Sbjct: 159 SMSSKIIGPDAD 170
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 105 bits (252), Expect = 4e-23
Identities = 60/132 (45%), Positives = 85/132 (64%), Gaps = 4/132 (3%)
Frame = +3
Query: 246 LGPQAMLKMLM----DPMGGIVMTNDGNAILRXITVQHPAAKSMIEIARTQDEEVGDGTT 413
LGP+ M K+L+ + GGI +TNDG IL+ I V +PAAK +++++ TQD EVGDGTT
Sbjct: 38 LGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTT 97
Query: 414 SVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQDKISVPVDLNDRDKMKEV 593
SV VLA E+L AE + Q IHP II YR+AL A L+ K S+ N RD + ++
Sbjct: 98 SVTVLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQESLK-KSSIESGDNIRDDLLKI 156
Query: 594 IRSCVGTKYIGR 629
R+ +G+K + +
Sbjct: 157 ARTTLGSKILSQ 168
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 105 bits (252), Expect = 4e-23
Identities = 51/129 (39%), Positives = 82/129 (63%)
Frame = +3
Query: 243 ALGPQAMLKMLMDPMGGIVMTNDGNAILRXITVQHPAAKSMIEIARTQDEEVGDGTTSVI 422
+LGP+ + KML+ P G + +TNDG I+ + VQH AK M+E++++QD E+GDGTT V+
Sbjct: 52 SLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVV 111
Query: 423 VLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQDKISVPVDLNDRDKMKEVIRS 602
VLAG +L AE + + IHP I + A + A+ L D IS + +R+++ E ++
Sbjct: 112 VLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETL-DSISDKFPVENRERLVETAQT 170
Query: 603 CVGTKYIGR 629
+G+K + R
Sbjct: 171 SLGSKIVNR 179
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 105 bits (252), Expect = 4e-23
Identities = 51/129 (39%), Positives = 82/129 (63%)
Frame = +3
Query: 243 ALGPQAMLKMLMDPMGGIVMTNDGNAILRXITVQHPAAKSMIEIARTQDEEVGDGTTSVI 422
+LGP+ + KML+ P G + +TNDG I+ + VQH AK M+E++++QD E+GDGTT V+
Sbjct: 52 SLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVV 111
Query: 423 VLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQDKISVPVDLNDRDKMKEVIRS 602
VLAG +L AE + + IHP I + A + A+ L D IS + +R+++ E ++
Sbjct: 112 VLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETL-DSISDKFPVENRERLVETAQT 170
Query: 603 CVGTKYIGR 629
+G+K + R
Sbjct: 171 SLGSKIVNR 179
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 105 bits (252), Expect = 4e-23
Identities = 51/129 (39%), Positives = 82/129 (63%)
Frame = +3
Query: 243 ALGPQAMLKMLMDPMGGIVMTNDGNAILRXITVQHPAAKSMIEIARTQDEEVGDGTTSVI 422
+LGP+ + KML+ P G + +TNDG I+ + VQH AK M+E++++QD E+GDGTT V+
Sbjct: 52 SLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVV 111
Query: 423 VLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQDKISVPVDLNDRDKMKEVIRS 602
VLAG +L AE + + IHP I + A + A+ L D IS + +R+++ E ++
Sbjct: 112 VLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETL-DSISDKFPVENRERLVETAQT 170
Query: 603 CVGTKYIGR 629
+G+K + R
Sbjct: 171 SLGSKIVNR 179
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 105 bits (252), Expect = 4e-23
Identities = 60/132 (45%), Positives = 85/132 (64%), Gaps = 4/132 (3%)
Frame = +3
Query: 246 LGPQAMLKMLM----DPMGGIVMTNDGNAILRXITVQHPAAKSMIEIARTQDEEVGDGTT 413
LGP+ M K+L+ + GGI +TNDG IL+ I V +PAAK +++++ TQD EVGDGTT
Sbjct: 38 LGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTT 97
Query: 414 SVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQDKISVPVDLNDRDKMKEV 593
SV VLA E+L AE + Q IHP II YR+AL A L+ K S+ N RD + ++
Sbjct: 98 SVTVLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQESLK-KSSIESGDNIRDDLLKI 156
Query: 594 IRSCVGTKYIGR 629
R+ +G+K + +
Sbjct: 157 ARTTLGSKILSQ 168
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 105 bits (252), Expect = 4e-23
Identities = 60/132 (45%), Positives = 85/132 (64%), Gaps = 4/132 (3%)
Frame = +3
Query: 246 LGPQAMLKMLM----DPMGGIVMTNDGNAILRXITVQHPAAKSMIEIARTQDEEVGDGTT 413
LGP+ M K+L+ + GGI +TNDG IL+ I V +PAAK +++++ TQD EVGDGTT
Sbjct: 38 LGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTT 97
Query: 414 SVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQDKISVPVDLNDRDKMKEV 593
SV VLA E+L AE + Q IHP II YR+AL A L+ K S+ N RD + ++
Sbjct: 98 SVTVLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQESLK-KSSIESGDNIRDDLLKI 156
Query: 594 IRSCVGTKYIGR 629
R+ +G+K + +
Sbjct: 157 ARTTLGSKILSQ 168
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 104 bits (250), Expect = 7e-23
Identities = 49/129 (37%), Positives = 84/129 (65%)
Frame = +3
Query: 243 ALGPQAMLKMLMDPMGGIVMTNDGNAILRXITVQHPAAKSMIEIARTQDEEVGDGTTSVI 422
+LGP+ M KM+ G + +TNDG IL ++V HP AK ++E+++ QD E GDGTT+V+
Sbjct: 50 SLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSKAQDIEAGDGTTTVV 109
Query: 423 VLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQDKISVPVDLNDRDKMKEVIRS 602
V+AG +L A+ L++ IHPT I ++ A +A +L D++S PVDL++ + ++ +
Sbjct: 110 VMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKIL-DEMSSPVDLSNDALLNKMATT 168
Query: 603 CVGTKYIGR 629
+ +K + +
Sbjct: 169 SLNSKVVSQ 177
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 104 bits (250), Expect = 7e-23
Identities = 49/129 (37%), Positives = 84/129 (65%)
Frame = +3
Query: 243 ALGPQAMLKMLMDPMGGIVMTNDGNAILRXITVQHPAAKSMIEIARTQDEEVGDGTTSVI 422
+LGP+ M KM+ G + +TNDG IL ++V HP AK ++E+++ QD E GDGTT+V+
Sbjct: 50 SLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSKAQDIEAGDGTTTVV 109
Query: 423 VLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQDKISVPVDLNDRDKMKEVIRS 602
V+AG +L A+ L++ IHPT I ++ A +A +L D++S PVDL++ + ++ +
Sbjct: 110 VMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKIL-DEMSSPVDLSNDALLNKMATT 168
Query: 603 CVGTKYIGR 629
+ +K + +
Sbjct: 169 SLNSKVVSQ 177
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 104 bits (249), Expect = 9e-23
Identities = 48/123 (39%), Positives = 79/123 (64%)
Frame = +3
Query: 246 LGPQAMLKMLMDPMGGIVMTNDGNAILRXITVQHPAAKSMIEIARTQDEEVGDGTTSVIV 425
LGP+ + K+++D G ++NDG IL+ + + PAA +M++IAR+QD EVGDGTTSV+V
Sbjct: 40 LGPRGLDKLIVDSKGATTISNDGATILKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVV 99
Query: 426 LAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQDKISVPVDLNDRDKMKEVIRSC 605
LA E+L +PF+ +HP ++IR +A E + L D + + +N +++E++ C
Sbjct: 100 LAAEILKQMKPFIEDGVHPQLLIRAIGKACEKTLKNLAD---LEIKINGETELREMLVKC 156
Query: 606 VGT 614
T
Sbjct: 157 AAT 159
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 104 bits (249), Expect = 9e-23
Identities = 48/123 (39%), Positives = 79/123 (64%)
Frame = +3
Query: 246 LGPQAMLKMLMDPMGGIVMTNDGNAILRXITVQHPAAKSMIEIARTQDEEVGDGTTSVIV 425
LGP+ + K+++D G ++NDG IL+ + + PAA +M++IAR+QD EVGDGTTSV+V
Sbjct: 40 LGPRGLDKLIVDSKGATTISNDGATILKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVV 99
Query: 426 LAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQDKISVPVDLNDRDKMKEVIRSC 605
LA E+L +PF+ +HP ++IR +A E + L D + + +N +++E++ C
Sbjct: 100 LAAEILKQMKPFIEDGVHPQLLIRAIGKACEKTLKNLAD---LEIKINGETELREMLVKC 156
Query: 606 VGT 614
T
Sbjct: 157 AAT 159
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 93.9 bits (223), Expect = 1e-19
Identities = 49/132 (37%), Positives = 75/132 (56%), Gaps = 1/132 (0%)
Frame = +3
Query: 246 LGPQAMLKMLMDPMGGIVMTNDGNAILRXITVQHPAAKSMIEIARTQDEEVGDGTTSVIV 425
LGP+ LKML+ G I +T DGN +L + +QHP A + + + QD+ GDGTTS ++
Sbjct: 38 LGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVL 97
Query: 426 LAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQD-KISVPVDLNDRDKMKEVIRS 602
L GE+L AE + + +HP ++ + A + LL+ K PV +RD + EV R+
Sbjct: 98 LIGELLKQAESLVLEGLHPRIVTEGFEWANTKTLELLEKFKKEAPV---ERDLLVEVCRT 154
Query: 603 CVGTKYIGRWAD 638
+ TK + AD
Sbjct: 155 ALRTKLHQKLAD 166
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 93.9 bits (223), Expect = 1e-19
Identities = 49/132 (37%), Positives = 75/132 (56%), Gaps = 1/132 (0%)
Frame = +3
Query: 246 LGPQAMLKMLMDPMGGIVMTNDGNAILRXITVQHPAAKSMIEIARTQDEEVGDGTTSVIV 425
LGP+ LKML+ G I +T DGN +L + +QHP A + + + QD+ GDGTTS ++
Sbjct: 38 LGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVL 97
Query: 426 LAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQD-KISVPVDLNDRDKMKEVIRS 602
L GE+L AE + + +HP ++ + A + LL+ K PV +RD + EV R+
Sbjct: 98 LIGELLKQAESLVLEGLHPRIVTEGFEWANTKTLELLEKFKKEAPV---ERDLLVEVCRT 154
Query: 603 CVGTKYIGRWAD 638
+ TK + AD
Sbjct: 155 ALRTKLHQKLAD 166
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 78.6 bits (185), Expect = 5e-15
Identities = 38/126 (30%), Positives = 72/126 (57%), Gaps = 1/126 (0%)
Frame = +3
Query: 243 ALGPQAMLKMLMDPMGGIVMTNDGNAILRXITVQHPAAKSMIEIARTQDEEVGDGTTSVI 422
A GP M KM+++ + + +TND IL+ + +QHPAA+ +I Q++++GD T +V+
Sbjct: 45 AYGPNGMNKMVINHIEKLFVTNDAATILKELEIQHPAARIIIMATEMQEKQIGDNTNTVV 104
Query: 423 VLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQD-KISVPVDLNDRDKMKEVIR 599
+LA +L A + + P + Y QA E A+ +L + D+ + +++++ IR
Sbjct: 105 ILAAALLEHAANLIHMGMTPQEVAAGYEQAAEKALEILPTLVVKEATDMKNIEEVRQYIR 164
Query: 600 SCVGTK 617
S + +K
Sbjct: 165 SAITSK 170
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 37.5 bits (83), Expect = 0.012
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Frame = +3
Query: 246 LGPQAMLKMLMDPMGGIVMTNDGNAILRXITV----QHPAAKSMIEIARTQDEEVGDGTT 413
+GP+ ++ G +T DG + + I + Q+ AK + ++A +EE GDGTT
Sbjct: 46 MGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKYQNLGAKLIQDVANKANEEAGDGTT 105
Query: 414 SVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQDKISVPV 560
VLA + + Q + I R A+E + L+ KIS V
Sbjct: 106 CATVLARAIAKEGFESIRQGGNAVEIRRGVMNAVEVVVAELK-KISKKV 153
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +3
Query: 246 LGPQAMLKMLMDPMGGIVMTNDGNAILRXITV----QHPAAKSMIEIARTQDEEVGDGTT 413
+GP+ ++ G +T DG + + I + Q+ AK + ++A +EE GDGTT
Sbjct: 46 MGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKYQNLGAKLIQDVANKANEEAGDGTT 105
Query: 414 SVIVL 428
VL
Sbjct: 106 CATVL 110
>Z30423-1|CAA83003.1| 1681|Caenorhabditis elegans Hypothetical
protein T20G5.1 protein.
Length = 1681
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 625 VVGQILXVDIALDAVNTVTVNDNGRIEVD 711
VVG +L VD + DA+ + +N G+ ++D
Sbjct: 817 VVGALLDVDCSEDAIKQLIINTRGKFDID 845
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 29.9 bits (64), Expect = 2.4
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = -2
Query: 637 SAQRPMYFVPTHERI-TSFILSLSFKSTGTEILS*SSTMASSKAWRYSLMMTVG*IFCVK 461
S Q P V T I TS S+S S G+ + S+ S+ + +TVG
Sbjct: 781 STQTPGSSVSTSAAILTSTQQSVSTNSPGSTVTRPSTVSGSTSS---GSTVTVGSTEAST 837
Query: 460 KGSAIANISPASTMTDVVPSPTSSS 386
GS++A+ SPA + T P+P++SS
Sbjct: 838 SGSSVASSSPAPS-TSQNPNPSTSS 861
>U00051-6|AAK70644.1| 259|Caenorhabditis elegans Hypothetical
protein F42G9.8 protein.
Length = 259
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 537 QDKISVPVDLNDRDKMKEVIRSCVGTKYIGRWAD 638
QD I VDLND++ +++ + TK + W D
Sbjct: 179 QDLIGDEVDLNDQEFSASQVKNSINTKALTSWFD 212
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,143,615
Number of Sequences: 27780
Number of extensions: 336003
Number of successful extensions: 808
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -