Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_J02
         (878 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1571 + 34504087-34504421,34505002-34505731,34506091-345120...    29   3.7  
02_03_0154 + 15797731-15798798                                         29   6.5  
04_04_1263 - 32207636-32207938,32208020-32208170,32208263-322085...    28   8.6  

>04_04_1571 + 34504087-34504421,34505002-34505731,34506091-34512077,
            34512493-34513964,34514114-34514377,34514761-34514978,
            34515759-34516030,34516190-34516559,34516578-34516797,
            34516819-34518931,34518941-34519193,34519269-34519401,
            34520597-34521114,34521207-34522115,34522195-34522368,
            34522833-34522882,34523963-34524035,34524413-34524477,
            34524736-34525522,34525622-34525878,34525989-34526109,
            34526315-34526956
          Length = 5320

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = +3

Query: 183  QALEEXLYNSILTGXYDSAVRQSLEYEXQGKGSIIQNVVNNLIIDKRRNTMEYCYKLWVG 362
            Q LE    N I+T   D  +RQ L        S++ N++ +  +D  +  +E C  +WVG
Sbjct: 1147 QLLELGKNNEIVT---DQVLRQELALVMPKIYSLLSNLIGSDEMDIVKVVLEGCRWIWVG 1203

Query: 363  NG 368
            +G
Sbjct: 1204 DG 1205


>02_03_0154 + 15797731-15798798
          Length = 355

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +3

Query: 93  PHKMQLLVVFALCMLAASAGVVELSADTSNQALEEXLYNSILTGXYDSAVRQSLE 257
           P K+  +V  +L  LAA  GV  ++ D S    E+  ++ ++   YD   R  LE
Sbjct: 22  PEKVSSVVRPSLVALAADRGVRLVAVDVSRPLAEQGPFDLLVHKMYDRGWRAQLE 76


>04_04_1263 -
           32207636-32207938,32208020-32208170,32208263-32208500,
           32208604-32208814,32208927-32209108,32209196-32209297,
           32210002-32211187,32212103-32212499,32212551-32212582,
           32212885-32213157,32213307-32213394,32213486-32213723,
           32213824-32214034,32214119-32214300,32214378-32214479,
           32214801-32216224,32216751-32216822,32217688-32217719,
           32218186-32218263,32218425-32218512,32218608-32218845,
           32219060-32219162,32219386-32219558,32219644-32219745,
           32219825-32220606,32220659-32221012,32224055-32224140,
           32224250-32224400,32224534-32224771,32224876-32225119,
           32225190-32225368,32225577-32225675,32225835-32227083
          Length = 3195

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = +3

Query: 339 YCYKLWV-GNGQEIVRKYFPLNFRTHHGRKLCQ--DHLQKLQP 458
           Y ++LW  GN  E++ K+F  ++  H     CQ  D L   +P
Sbjct: 720 YAWRLWKDGNATELLDKFFVDSYPLHEAFSFCQSDDRLTPAKP 762


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,715,516
Number of Sequences: 37544
Number of extensions: 315599
Number of successful extensions: 761
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)