Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_J02
(878 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g64255.1 68414.m07280 SWIM zinc finger family protein contain... 32 0.58
At4g02180.1 68417.m00290 DC1 domain-containing protein contains ... 31 1.3
At3g43890.1 68416.m04698 DC1 domain-containing protein contains ... 31 1.3
At4g01930.1 68417.m00257 DC1 domain-containing protein contains ... 30 1.8
At1g69390.1 68414.m07966 chloroplast division protein, putative ... 30 1.8
At4g01910.1 68417.m00251 DC1 domain-containing protein contains ... 29 3.1
At5g59210.2 68418.m07421 myosin heavy chain-related contains wea... 29 4.1
At5g59210.1 68418.m07420 myosin heavy chain-related contains wea... 29 4.1
At4g01760.1 68417.m00229 DC1 domain-containing protein similar t... 29 5.4
At4g02190.1 68417.m00291 DC1 domain-containing protein contains ... 28 7.2
At1g65180.1 68414.m07390 DC1 domain-containing protein contains ... 28 7.2
At4g11540.1 68417.m01851 DC1 domain-containing protein contains ... 28 9.5
At2g31370.2 68415.m03834 bZIP transcription factor (POSF21) iden... 28 9.5
At2g31370.1 68415.m03833 bZIP transcription factor (POSF21) iden... 28 9.5
>At1g64255.1 68414.m07280 SWIM zinc finger family protein contains
Pfam profile PF04434: SWIM zinc finger
Length = 750
Score = 31.9 bits (69), Expect = 0.58
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 306 LIIDKRRNTMEYCYKLWVGNGQEIVRKYFPLNF 404
+++D + EY KL + +G + KYFPL F
Sbjct: 386 IVVDTKNLNCEYQLKLMIASGVDAANKYFPLAF 418
>At4g02180.1 68417.m00290 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 989
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 103 CNFSLXLRCACSPPARASLN 162
CNF+L LRC +PP ++ LN
Sbjct: 251 CNFTLDLRCVLNPPQQSLLN 270
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 103 CNFSLXLRCACSPPARASLN 162
CNF+L LRC +PP ++ LN
Sbjct: 555 CNFTLDLRCVLNPPPQSLLN 574
>At3g43890.1 68416.m04698 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 661
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Frame = +1
Query: 103 CNFSLXLRCACSPPAR--ASLN---XPRTLLTKPSRXNCTT 210
CNFSL L+C PP + LN P TL+ K CTT
Sbjct: 227 CNFSLDLQCVFHPPKQNPHDLNIHDHPLTLMPKSISFTCTT 267
>At4g01930.1 68417.m00257 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 652
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 97 TKCNFSLXLRCACSPPARASLN 162
+ CNF+L +RC +PP ++ LN
Sbjct: 216 SSCNFTLDMRCVLNPPQQSLLN 237
>At1g69390.1 68414.m07966 chloroplast division protein, putative
(MinE1) identical to chloroplast division protein
homolog MinE1 GI:17511220 from [Arabidopsis thaliana]
Length = 229
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 132 MLAASAGVVELSADTSNQALEEXLYNSILTGXYD 233
+LA + G ELS + Q +E LYN+I G +D
Sbjct: 70 VLARNTGDYELSPSPAEQEIESFLYNAINMGFFD 103
>At4g01910.1 68417.m00251 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 651
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 97 TKCNFSLXLRCACSPPARASLN 162
+ CNF+L +RC PP ++ LN
Sbjct: 217 SSCNFTLDMRCVLHPPQQSLLN 238
>At5g59210.2 68418.m07421 myosin heavy chain-related contains weak
similarity to Myosin heavy chain, gizzard smooth muscle
(Swiss-Prot:P10587) [Gallus gallus]
Length = 433
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +3
Query: 159 ELSADTSNQALE-EXLY--NSILTGXYDSAVRQSLEYEXQGKGSIIQNVVNNLIIDKRR 326
+L + NQ+ E E L+ NS L+ Y ++ S ++E Q K + QNV ++DK R
Sbjct: 285 KLLMEIDNQSSEIEKLFEENSNLSASYQESINISNQWENQVKECLKQNVELREVLDKLR 343
>At5g59210.1 68418.m07420 myosin heavy chain-related contains weak
similarity to Myosin heavy chain, gizzard smooth muscle
(Swiss-Prot:P10587) [Gallus gallus]
Length = 434
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +3
Query: 159 ELSADTSNQALE-EXLY--NSILTGXYDSAVRQSLEYEXQGKGSIIQNVVNNLIIDKRR 326
+L + NQ+ E E L+ NS L+ Y ++ S ++E Q K + QNV ++DK R
Sbjct: 286 KLLMEIDNQSSEIEKLFEENSNLSASYQESINISNQWENQVKECLKQNVELREVLDKLR 344
>At4g01760.1 68417.m00229 DC1 domain-containing protein similar to
T15B16.10 similar to A. thaliana CHP-rich proteins
encoded by T10M13, GenBank accession number AF001308
Length = 667
Score = 28.7 bits (61), Expect = 5.4
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +1
Query: 97 TKCNFSLXLRCACSPPARASLN 162
+ CNF+L +RC +PP ++ L+
Sbjct: 226 SSCNFTLDMRCVLNPPPKSVLD 247
>At4g02190.1 68417.m00291 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 659
Score = 28.3 bits (60), Expect = 7.2
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +1
Query: 103 CNFSLXLRCACSPPA 147
CNF+L +RCA +PP+
Sbjct: 223 CNFTLDMRCALNPPS 237
>At1g65180.1 68414.m07390 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 653
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Frame = +1
Query: 103 CNFSLXLRCACSPPA-----RASLNXPRTLLTKPSRXNCTT 210
CNF+L LRC PP + + N TL+ K CTT
Sbjct: 214 CNFTLDLRCVSLPPPLNLHDQNTHNHELTLMPKLISFTCTT 254
>At4g11540.1 68417.m01851 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 525
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 97 TKCNFSLXLRCACSPP 144
+ CNFSL +RC +PP
Sbjct: 130 SSCNFSLDMRCVINPP 145
>At2g31370.2 68415.m03834 bZIP transcription factor (POSF21)
identical to GB:Q04088
Length = 398
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +1
Query: 541 RQLEVHYLVGEQQSVLQDPQH*VQPVLEDEYDDLQLQQSRPCCIRXXQR*QHXGAMVLP 717
+QL++H +QQ Q QH Q + +Y Q Q + R Q+ Q G + P
Sbjct: 333 QQLQIHSQKQQQQQQQQQQQHQQQQQQQQQYQFQQQQMQQLMQQRLQQQEQQNGVRLKP 391
>At2g31370.1 68415.m03833 bZIP transcription factor (POSF21)
identical to GB:Q04088
Length = 398
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +1
Query: 541 RQLEVHYLVGEQQSVLQDPQH*VQPVLEDEYDDLQLQQSRPCCIRXXQR*QHXGAMVLP 717
+QL++H +QQ Q QH Q + +Y Q Q + R Q+ Q G + P
Sbjct: 333 QQLQIHSQKQQQQQQQQQQQHQQQQQQQQQYQFQQQQMQQLMQQRLQQQEQQNGVRLKP 391
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,023,061
Number of Sequences: 28952
Number of extensions: 242185
Number of successful extensions: 674
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 674
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2067932800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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