Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_I24
(924 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0415 - 13661745-13664240,13664376-13664401,13665018-136650... 32 0.56
02_01_0075 - 522554-522616,522742-522748,523033-523136,523237-52... 32 0.74
02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665 31 0.98
04_01_0180 + 2034021-2034023,2034741-2035088 30 2.3
11_01_0727 - 6010537-6010548,6011029-6011606,6011709-6011774,601... 29 5.2
12_02_1035 - 25570009-25571241,25571940-25573709,25573797-255751... 29 6.9
08_02_0776 - 21083181-21083187,21083256-21083683,21083800-210840... 29 6.9
12_02_0847 + 23630937-23631099,23631200-23631396,23631604-236317... 28 9.1
01_01_0933 - 7368672-7368785,7368860-7368895,7369581-7369715,736... 28 9.1
>05_03_0415 -
13661745-13664240,13664376-13664401,13665018-13665035,
13665914-13666181,13666531-13666598,13667102-13667243
Length = 1005
Score = 32.3 bits (70), Expect = 0.56
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = -3
Query: 463 PCARCSASTVPKPPWPCRSRLRALPWRLLAKALSCCSTDSEPSFXXLLKSCAS 305
P R SA T+ WP L A+ +R L AL+CC + S PS L++C S
Sbjct: 99 PGLRASAPTLR---WPFPRLLDAIAFRPLPCALACCGS-SAPSVVRHLRACGS 147
>02_01_0075 -
522554-522616,522742-522748,523033-523136,523237-523368,
525209-525401,525978-526330,526693-526791,526864-526935,
527062-527213,527338-527386,527755-527885,528067-528307,
528392-528565,528656-528797,529236-529282,529370-529450,
530170-530271,530345-530440,531437-531444,531575-531616,
531830-531894,534761-534853,534888-534959,535303-535509,
536318-537226,537503-538158
Length = 1429
Score = 31.9 bits (69), Expect = 0.74
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = +1
Query: 394 ALGDANGKAKEALEQSRQNIERTXEELRKAHPDVEKNATXLREKLQAXVQNTVQESQKLA 573
A+ DA G+ ++A+E ++ E+L A+PDVE L E L+ ++ ++ + L
Sbjct: 515 AIYDAMGRVEDAIEILEHVLKVREEKLGTANPDVEDEKLRLAELLKEAGRSRNRKQKSLE 574
Query: 574 KKVSSNVQETNE 609
+N Q +
Sbjct: 575 NLFVTNSQRVKK 586
>02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665
Length = 727
Score = 31.5 bits (68), Expect = 0.98
Identities = 18/72 (25%), Positives = 35/72 (48%)
Frame = +1
Query: 403 DANGKAKEALEQSRQNIERTXEELRKAHPDVEKNATXLREKLQAXVQNTVQESQKLAKKV 582
DA G+ EA+E + E+L A+PDV+ L E L+ + ++++ L +
Sbjct: 637 DAMGRLDEAIEILEHVVGMREEKLGTANPDVDDEKRRLAELLKEAGRGRSRKAKSLENLL 696
Query: 583 SSNVQETNEKLA 618
+N +++A
Sbjct: 697 ETNPYTVTKRVA 708
>04_01_0180 + 2034021-2034023,2034741-2035088
Length = 116
Score = 30.3 bits (65), Expect = 2.3
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 424 EALEQSRQNIERTXEELRKAHPDVEKNATXLREK 525
EALE+ QN+ R EE +K H +++K L K
Sbjct: 52 EALERQVQNLTRYKEEKQKQHANLQKEFAELERK 85
>11_01_0727 -
6010537-6010548,6011029-6011606,6011709-6011774,
6011867-6011964,6013238-6013608
Length = 374
Score = 29.1 bits (62), Expect = 5.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +1
Query: 115 PPHSVSRQYIMAAKFVVLFACIALAQGSDGATR 213
PPH VSR ++ AA F A A A+G D R
Sbjct: 41 PPHQVSRPWLPAAGFRSSAAASAAARGDDYGRR 73
>12_02_1035 -
25570009-25571241,25571940-25573709,25573797-25575118,
25575208-25575555,25576540-25576633
Length = 1588
Score = 28.7 bits (61), Expect = 6.9
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 520 EKLQAXVQNTVQESQKLAKKVSSNVQETN 606
EKLQ + + QE+Q+L KK+SS ++ ++
Sbjct: 153 EKLQKEISSLSQENQELKKKISSVLENSD 181
>08_02_0776 -
21083181-21083187,21083256-21083683,21083800-21084048,
21084172-21084248,21084351-21084483
Length = 297
Score = 28.7 bits (61), Expect = 6.9
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +1
Query: 400 GDANGKAKEAL-EQSRQNIERTXEELRKAHPDVE-KNATXLREKLQA-XVQNTVQESQKL 570
GD++G AKE L + SR ++ E RK +E K LR + Q +Q+ ++ +Q++
Sbjct: 120 GDSDGDAKEGLRDSSRSMVQMQREVQRKLQEQIEVKRHLQLRMEAQGRYLQSVLRRAQQV 179
>12_02_0847 +
23630937-23631099,23631200-23631396,23631604-23631738,
23631904-23632077,23632195-23632407,23632507-23632751,
23632890-23632930,23633200-23633238,23633552-23633565
Length = 406
Score = 28.3 bits (60), Expect = 9.1
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +1
Query: 397 LGDAN-GKAKEALEQSRQNIERTXEELRKAHPDVEKNATXLREKLQAXVQNTVQESQKLA 573
L D N G+A AL ++E EEL K D++ L K + V + LA
Sbjct: 195 LSDPNAGEASGALVSKDDDLEAVREELIKGFLDIDNGGRKLGIKEMGQLNEKVFQIACLA 254
Query: 574 KKVSSNVQETNEKL 615
K V E + +L
Sbjct: 255 KLPPEEVGEASYEL 268
>01_01_0933 -
7368672-7368785,7368860-7368895,7369581-7369715,
7369825-7369989,7370060-7370140,7370316-7370391,
7370479-7370612,7370706-7370798,7371860-7372188,
7372290-7372350,7372407-7372778
Length = 531
Score = 28.3 bits (60), Expect = 9.1
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = -3
Query: 481 PCGAPRPCARCSASTVPKPPWPCRSRLRALPWRLLAKALSC 359
PC P P R ++T + PW R R + W L C
Sbjct: 26 PCTTPAPRMRSLSATTTRRPWRTGWRGRPMRWASLVVMKLC 66
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,023,855
Number of Sequences: 37544
Number of extensions: 191323
Number of successful extensions: 871
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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