Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_I23
         (865 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0417 - 3692247-3692329,3692442-3692504,3693233-3693350,369...    68   8e-12
03_05_0107 - 20883353-20883627,20883739-20883801,20884608-208847...    67   2e-11
06_01_0108 - 860080-860162,860276-860338,860857-860974,861481-86...    64   1e-10
04_04_1623 - 34846056-34846223,34846547-34846644,34846738-348468...    54   1e-07

>08_01_0417 -
           3692247-3692329,3692442-3692504,3693233-3693350,
           3694084-3694095
          Length = 91

 Score = 68.1 bits (159), Expect = 8e-12
 Identities = 36/84 (42%), Positives = 50/84 (59%)
 Frame = +3

Query: 111 MSLQEKFDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDA 290
           M LQE F+Q A   K L    ++   L LY  +KQATVGD + A RPG+   + +AK+DA
Sbjct: 1   MGLQEDFEQYAEKAKTLPESTSNENKLILYGLYKQATVGDVNTA-RPGIFAQRDRAKWDA 59

Query: 291 WHKLAGTSKDDAQKAYIEIVEGLI 362
           W  + G SK++A   YI  V+ L+
Sbjct: 60  WKAVEGKSKEEAMSDYITKVKQLL 83


>03_05_0107 -
           20883353-20883627,20883739-20883801,20884608-20884725,
           20885012-20885023
          Length = 155

 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 35/83 (42%), Positives = 50/83 (60%)
 Frame = +3

Query: 111 MSLQEKFDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDA 290
           M LQE F++ A  VK L    ++   L LY  +KQATVGD +  +RPG+   + +AK+DA
Sbjct: 1   MGLQEDFEEYAEKVKTLPESTSNEDKLILYGLYKQATVGDVN-TSRPGIFAQRDRAKWDA 59

Query: 291 WHKLAGTSKDDAQKAYIEIVEGL 359
           W  + G SK++A   YI  V+ L
Sbjct: 60  WKAVEGKSKEEAMSDYITKVKQL 82


>06_01_0108 -
           860080-860162,860276-860338,860857-860974,861481-861492
          Length = 91

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 34/84 (40%), Positives = 49/84 (58%)
 Frame = +3

Query: 111 MSLQEKFDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDA 290
           M LQE+F++ A   K L    ++   L LY  +KQATVG      RPG+ +LK + K+DA
Sbjct: 1   MGLQEEFEEFAEKAKTLPDTISNEDKLLLYGLYKQATVGPVT-TGRPGIFNLKDRYKWDA 59

Query: 291 WHKLAGTSKDDAQKAYIEIVEGLI 362
           W  + G SK++A   YI  V+ L+
Sbjct: 60  WKAVEGKSKEEAMADYITKVKQLL 83


>04_04_1623 -
           34846056-34846223,34846547-34846644,34846738-34846829,
           34847096-34847202,34847385-34847490,34848108-34848547
          Length = 336

 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
 Frame = +3

Query: 60  SFGTGVSSFNKLPHLINMSLQEKFDQA----AANVKNLKALPTDAQLLNLYAHFKQATVG 227
           S G+G  S +    + +  L E F  A    AA+  +  ++P  AQL  LY  +K AT G
Sbjct: 71  SDGSGSDSDSDWEGVESTELDEDFSAASAFVAASAASGTSVPEQAQL-QLYGLYKIATEG 129

Query: 228 DADPANRPGLLDLKGKAKFDAWHKLAGTSKDDAQKAYIEIVEGL 359
               A +P  L LK +AK++AWHKL     ++A + YI +V+ L
Sbjct: 130 PCT-APQPSALKLKARAKWNAWHKLGAMPTEEAMQKYITVVDEL 172


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,565,961
Number of Sequences: 37544
Number of extensions: 324396
Number of successful extensions: 704
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)