Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_I23
         (865 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme...   100   3e-21
Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical pr...    80   2e-15
Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical pr...    65   5e-11
Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical pr...    53   2e-07
AL023828-1|CAA19448.1|  115|Caenorhabditis elegans Hypothetical ...    49   5e-06
Z81120-7|CAB03343.2|  274|Caenorhabditis elegans Hypothetical pr...    44   1e-04
U00063-1|AAK18960.1|  146|Caenorhabditis elegans Acyl-coenzyme a...    39   0.005
U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical pr...    33   0.26 
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical...    32   0.46 
Z95559-11|CAB09005.2|  435|Caenorhabditis elegans Hypothetical p...    32   0.61 
Z81069-8|CAB02996.2|  600|Caenorhabditis elegans Hypothetical pr...    28   7.5  
AL021448-4|CAA16278.2|  600|Caenorhabditis elegans Hypothetical ...    28   7.5  

>AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 1 protein.
          Length = 86

 Score = 99.5 bits (237), Expect = 3e-21
 Identities = 48/82 (58%), Positives = 60/82 (73%)
 Frame = +3

Query: 129 FDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAG 308
           FD AAA VK LK  P++ +LL LYA FKQ TVGD +  ++PG+ DLKGKAK+ AW +  G
Sbjct: 5   FDDAAATVKTLKTSPSNDELLKLYALFKQGTVGD-NTTDKPGMFDLKGKAKWSAWDEKKG 63

Query: 309 TSKDDAQKAYIEIVEGLIASIG 374
            +KDDAQKAY+ +VE LIA  G
Sbjct: 64  LAKDDAQKAYVALVEELIAKYG 85


>Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical
           protein R06F6.9 protein.
          Length = 385

 Score = 79.8 bits (188), Expect = 2e-15
 Identities = 39/94 (41%), Positives = 58/94 (61%)
 Frame = +3

Query: 84  FNKLPHLINMSLQEKFDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLD 263
           +N    + + S Q  F++A  N+K LK  P +   L LY  FKQAT GD     RPG++D
Sbjct: 14  YNPQVSVRSFSAQADFEKAQKNLKTLKEEPDNDVKLQLYGLFKQATAGDVQ-GKRPGMMD 72

Query: 264 LKGKAKFDAWHKLAGTSKDDAQKAYIEIVEGLIA 365
             G+AK+DAW+ L G ++D+A+  Y ++V GLI+
Sbjct: 73  FVGRAKYDAWNTLKGQTQDEARANYAKLVGGLIS 106


>Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical
           protein F47B10.7 protein.
          Length = 116

 Score = 65.3 bits (152), Expect = 5e-11
 Identities = 35/91 (38%), Positives = 57/91 (62%), Gaps = 4/91 (4%)
 Frame = +3

Query: 111 MSLQEKFDQAAANVKNL-KALP---TDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKA 278
           MSLQEKFD A   ++ L K  P   ++ Q L  Y+ FKQA++GD +  +RPG+  +  + 
Sbjct: 1   MSLQEKFDAAVEIIQKLPKTGPVATSNDQKLTFYSLFKQASIGDVN-TDRPGIFSIIERK 59

Query: 279 KFDAWHKLAGTSKDDAQKAYIEIVEGLIASI 371
           K+D+W +L G S+D+A++ YI+ +  +   I
Sbjct: 60  KWDSWKELEGVSQDEAKERYIKALNDMFDKI 90


>Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical
           protein C18D11.2 protein.
          Length = 266

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 28/68 (41%), Positives = 42/68 (61%)
 Frame = +3

Query: 189 LNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKDDAQKAYIEIVEGLIAS 368
           LN YA FKQAT G  D   +P   D++G  K++AW+KL   + D+A++AY++ +   I  
Sbjct: 28  LNFYALFKQATHGKCD-LPKPSFYDIQGVYKWNAWNKLDNMTMDEAKQAYVDSIVQKIRE 86

Query: 369 IGLKEXKT 392
           +  KE KT
Sbjct: 87  V-QKEYKT 93


>AL023828-1|CAA19448.1|  115|Caenorhabditis elegans Hypothetical
           protein Y17G7B.1 protein.
          Length = 115

 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
 Frame = +3

Query: 129 FDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDA--DPANRPGLLDLKGKAKFDAWHKL 302
           F+ AA  ++ LK+ PTD + L LYA +KQA  GD   +        D  G+ K+ AW   
Sbjct: 15  FEIAAEEMRRLKSEPTDRERLKLYALYKQALHGDIPNEDVYPVPAGDEVGRKKYAAWKSQ 74

Query: 303 AGTSKDDAQKAYIEIVEGLIASIG 374
            G + +  +  Y+ I E +I   G
Sbjct: 75  KGANSEKCRADYVAIAEEMIKKYG 98


>Z81120-7|CAB03343.2|  274|Caenorhabditis elegans Hypothetical
           protein T12D8.3 protein.
          Length = 274

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 28/103 (27%), Positives = 44/103 (42%)
 Frame = +3

Query: 60  SFGTGVSSFNKLPHLINMSLQEKFDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADP 239
           SF     + N+    I+  L+ KFD A   +           +L  Y  +KQA  G AD 
Sbjct: 9   SFQDHPKNENQEEEPIDTLLEAKFDAATTRLPGFLTKIDQKTILKFYGLYKQAVEGPADS 68

Query: 240 ANRPGLLDLKGKAKFDAWHKLAGTSKDDAQKAYIEIVEGLIAS 368
              P   +   + KF++W   +  S+  A +AY E++  L  S
Sbjct: 69  KKGPYWFETVARKKFNSWLANSQMSRSRAMEAYCELMAQLDTS 111


>U00063-1|AAK18960.1|  146|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 4 protein.
          Length = 146

 Score = 38.7 bits (86), Expect = 0.005
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
 Frame = +3

Query: 114 SLQEKFDQAAANVKNL-KALPTDAQL---LNLYAHFKQATVGDADPANRPGLLDLKGKAK 281
           SL E+F+ A   +  L K  P    +   L +Y+ +KQAT G  D   +P    ++ + K
Sbjct: 4   SLDEQFEAAVWIINALPKNGPIKTSINDQLQMYSLYKQATSGKCDTI-QPYFFQIEQRMK 62

Query: 282 FDAWHKLAGTSKDDAQKAYIE 344
           ++AW++L    + +A+  Y+E
Sbjct: 63  WNAWNQLGNMDEAEAKAQYVE 83


>U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical
           protein F26A1.15 protein.
          Length = 219

 Score = 33.1 bits (72), Expect = 0.26
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +3

Query: 264 LKGKAKFDAWHKLAGTSKDDAQKAYIEIVEGL 359
           + G  K+ AW+K  G +K++A + Y+E V+ L
Sbjct: 157 INGNEKWHAWNKCRGLTKEEASEQYVEAVQKL 188


>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
            protein Y66D12A.14 protein.
          Length = 2870

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 20/35 (57%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +1

Query: 46   SKTSVRSGRVYRRLTSYHI*SICLSKKNLT-KPQP 147
            SKTS    + YRRL+ Y   S CLSKK LT K QP
Sbjct: 2149 SKTSTTYAQAYRRLSQY---SSCLSKKFLTSKAQP 2180


>Z95559-11|CAB09005.2|  435|Caenorhabditis elegans Hypothetical
           protein Y41E3.7a protein.
          Length = 435

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +3

Query: 189 LNLYAHFKQATVGD-ADPANRPGLLDLKGKAKFDAWHKLAGTSKDDAQKAYIEIVE 353
           + L +  KQ   G+ +D  +  G LD+ G     AW +L   S+D+A  +++ +V+
Sbjct: 51  IKLLSLSKQVQHGEISDEFDNAGWLDITGNDVNKAWRELGSLSRDEAMASFVFLVD 106


>Z81069-8|CAB02996.2|  600|Caenorhabditis elegans Hypothetical
           protein Y2H9A.4 protein.
          Length = 600

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +3

Query: 72  GVSSFNKLPHLINMSLQEKFDQAAANV-KNLKALPTDAQLLNLYAH 206
           GV   N+LP+    SLQ + D     + KN+K +   AQLL  Y++
Sbjct: 288 GVDQDNQLPNTSRFSLQNELDSLERTLQKNIK-VDVGAQLLEKYSN 332


>AL021448-4|CAA16278.2|  600|Caenorhabditis elegans Hypothetical
           protein Y2H9A.4 protein.
          Length = 600

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +3

Query: 72  GVSSFNKLPHLINMSLQEKFDQAAANV-KNLKALPTDAQLLNLYAH 206
           GV   N+LP+    SLQ + D     + KN+K +   AQLL  Y++
Sbjct: 288 GVDQDNQLPNTSRFSLQNELDSLERTLQKNIK-VDVGAQLLEKYSN 332


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,387,520
Number of Sequences: 27780
Number of extensions: 279027
Number of successful extensions: 586
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 581
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)