Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_I23
(865 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g31812.1 68414.m03905 acyl-CoA binding protein / ACBP identic... 69 4e-12
At4g27780.1 68417.m03990 acyl-CoA binding protein 2 (ACBP2) iden... 45 8e-05
At5g53470.1 68418.m06645 acyl-CoA binding protein, putative / AC... 42 4e-04
At3g05420.2 68416.m00594 acyl-CoA binding family protein similar... 36 0.046
At3g05420.1 68416.m00593 acyl-CoA binding family protein similar... 36 0.046
At3g13620.1 68416.m01714 amino acid permease family protein weak... 29 5.3
At5g65205.1 68418.m08201 short-chain dehydrogenase/reductase (SD... 28 7.0
>At1g31812.1 68414.m03905 acyl-CoA binding protein / ACBP identical
to acyl-CoA-binding protein (ACBP) [Arabidopsis
thaliana] SWISS-PROT:P57752
Length = 92
Score = 68.9 bits (161), Expect = 4e-12
Identities = 34/84 (40%), Positives = 51/84 (60%)
Frame = +3
Query: 111 MSLQEKFDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDA 290
M L+E+F++ A V L LP++ LL LY +KQA G D +RPG+ +K +AK+DA
Sbjct: 1 MGLKEEFEEHAEKVNTLTELPSNEDLLILYGLYKQAKFGPVD-TSRPGMFSMKERAKWDA 59
Query: 291 WHKLAGTSKDDAQKAYIEIVEGLI 362
W + G S ++A YI V+ L+
Sbjct: 60 WKAVEGKSSEEAMNDYITKVKQLL 83
>At4g27780.1 68417.m03990 acyl-CoA binding protein 2 (ACBP2)
identical to acyl-CoA binding protein 2 [Arabidopsis
thaliana] gi|12039034|gb|AAG46057
Length = 354
Score = 44.8 bits (101), Expect = 8e-05
Identities = 28/77 (36%), Positives = 40/77 (51%)
Frame = +3
Query: 129 FDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAG 308
F AA + + +P+D Q LY +K AT G A +P L + +AK+ AW KL
Sbjct: 114 FVTTAAADRLSQKVPSDVQQ-QLYGLYKIATEGPCT-APQPSALKMTARAKWQAWQKLGA 171
Query: 309 TSKDDAQKAYIEIVEGL 359
++A + YIEIV L
Sbjct: 172 MPPEEAMEKYIEIVTQL 188
>At5g53470.1 68418.m06645 acyl-CoA binding protein, putative / ACBP,
putative similar to acyl-CoA binding protein 2
[Arabidopsis thaliana] gi|12039034|gb|AAG46057
Length = 338
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/77 (33%), Positives = 41/77 (53%)
Frame = +3
Query: 129 FDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAG 308
F AAA+ + + + + QL LY +K AT G A +P L + +AK+ AW KL
Sbjct: 104 FVAAAASDRLSQKVSNELQL-QLYGLYKIATEGPCT-APQPSALKMTARAKWQAWQKLGA 161
Query: 309 TSKDDAQKAYIEIVEGL 359
++A + YI++V L
Sbjct: 162 MPPEEAMEKYIDLVTQL 178
>At3g05420.2 68416.m00594 acyl-CoA binding family protein similar to
PIR|S68824|S68824 rngB protein, cytosolic (Dictyostelium
discoideum); contains Pfam profiles PF00887: Acyl CoA
binding protein, PF01344: Kelch motif
Length = 669
Score = 35.5 bits (78), Expect = 0.046
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = +3
Query: 132 DQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGT 311
D +A NV + P D LL LYA ++QATVG + +P ++K+ +W L
Sbjct: 29 DSSAKNV--ISKFPDDTALL-LYALYQQATVGPCN-TPKPSAWRPVEQSKWKSWQGLGTM 84
Query: 312 SKDDAQKAYIEIVE 353
+A + +++I+E
Sbjct: 85 PSIEAMRLFVKILE 98
>At3g05420.1 68416.m00593 acyl-CoA binding family protein similar to
PIR|S68824|S68824 rngB protein, cytosolic (Dictyostelium
discoideum); contains Pfam profiles PF00887: Acyl CoA
binding protein, PF01344: Kelch motif
Length = 668
Score = 35.5 bits (78), Expect = 0.046
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = +3
Query: 132 DQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGT 311
D +A NV + P D LL LYA ++QATVG + +P ++K+ +W L
Sbjct: 29 DSSAKNV--ISKFPDDTALL-LYALYQQATVGPCN-TPKPSAWRPVEQSKWKSWQGLGTM 84
Query: 312 SKDDAQKAYIEIVE 353
+A + +++I+E
Sbjct: 85 PSIEAMRLFVKILE 98
>At3g13620.1 68416.m01714 amino acid permease family protein weak
similarity to SP|Q9WTR6 Cystine/glutamate transporter
(Amino acid transport system xc-) {Mus musculus};
contains Pfam profile PF00324: Amino acid permease
Length = 478
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 202 AYKLRSWASVGRAFRFFTLAAAWSNFSWRDILI 104
AY+L A +G +FF + + W N W ILI
Sbjct: 314 AYQLEGMAELGFLPKFFGVRSKWFNTPWVGILI 346
>At5g65205.1 68418.m08201 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198 short
chain dehydrogenase/reductase SDR family
Length = 285
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 69 TGVSSFNKLPHL-INMSLQEKFDQAAANVKNLKALPTD 179
+G+SSFN LP L + ++ + A +N+K +PT+
Sbjct: 193 SGISSFNNLPELKLYKPFEDAIRERAFLSQNIKPIPTE 230
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,376,020
Number of Sequences: 28952
Number of extensions: 261713
Number of successful extensions: 612
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 608
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2019160800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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