Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_I21
(874 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 99 1e-19
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 93 8e-18
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 83 7e-15
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 3e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 53 1e-05
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 46 0.001
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 42 0.020
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.083
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 39 0.14
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 38 0.44
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 37 0.58
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 35 2.3
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.4
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 34 5.4
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.4
UniRef50_Q93CL0 Cluster: Variable surface lipoprotein Vsp422-9; ... 33 7.2
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 99.1 bits (236), Expect = 1e-19
Identities = 64/125 (51%), Positives = 67/125 (53%)
Frame = +1
Query: 487 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRXGL*RYQAFPPWXAPLXRSPVP 666
SK+ T R RFSIGSAPLTSITKIDAQVRGGETR + F P AP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRF-PLEAPSCALLFR 60
Query: 667 TLPLTGYLSRLSPLXEAWRFLIXPXVXISVRCXSFAPTWAVCXNXXXXXXXXXXXXXIVL 846
L S L EAWRFLI V ISVRC SFAP+WAVC N IVL
Sbjct: 61 PCRLPDTCPPFS-LREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVL 119
Query: 847 SPPGK 861
SP K
Sbjct: 120 SPTRK 124
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 93.1 bits (221), Expect = 8e-18
Identities = 52/88 (59%), Positives = 56/88 (63%)
Frame = -2
Query: 855 GWTQDDXXXXXXXXXXXRGVXAHSPGWSERXTPN*DTYXGXYEKAPRFXKGRKAGQVSGK 676
GWTQDD RGV A+SP WSER P+ DT YEKAPRF KG+KA QVSGK
Sbjct: 9 GWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGK 68
Query: 675 RQGRNRRAXEGSXPGGKRLVSL*SXSGF 592
RQGRNRRA EG+ G K SL S GF
Sbjct: 69 RQGRNRRAHEGA-AGEKSPASL-SPVGF 94
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 83.4 bits (197), Expect = 7e-15
Identities = 54/104 (51%), Positives = 60/104 (57%)
Frame = +1
Query: 319 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 498
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT--------DGDGNFLEDT-RKTLSKEE 76
Query: 499 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRXGL*RYQAFP 630
RPR RFSIGSAPLTSI K DAQ+ GGETR + FP
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFP 117
Score = 38.7 bits (86), Expect = 0.19
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = +2
Query: 566 KSTLKSEVAKPXQDYKDTRRFPPGKLPSCALLFRPCRLP 682
KS + + QDYKD RRFP PSCALLF P LP
Sbjct: 96 KSDAQISGGETRQDYKDPRRFPL-VAPSCALLFLPFGLP 133
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -2
Query: 495 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 382
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 295 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 462
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 52.8 bits (121), Expect = 1e-05
Identities = 27/42 (64%), Positives = 30/42 (71%)
Frame = +1
Query: 505 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRXGL*RYQAFP 630
V+ PR RFSIGSAPLTSITK DAQ+ GGETR + FP
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFP 85
Score = 39.1 bits (87), Expect = 0.14
Identities = 20/35 (57%), Positives = 22/35 (62%)
Frame = +2
Query: 566 KSTLKSEVAKPXQDYKDTRRFPPGKLPSCALLFRP 670
KS + + QDYKDTRRFP PSCALLF P
Sbjct: 64 KSDAQISGGETRQDYKDTRRFPLAA-PSCALLFLP 97
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/36 (58%), Positives = 21/36 (58%)
Frame = -2
Query: 861 LTGWTQDDXXXXXXXXXXXRGVXAHSPGWSERXTPN 754
L GWTQDD RGV AHSP WSER TPN
Sbjct: 7 LPGWTQDDSYRIRRSGRAERGVRAHSPAWSERPTPN 42
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 97 DPDMIRYIDEFGQTTTRMQ 153
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 414 HSKAVIRLSTESGDNAGKNM 473
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 41.9 bits (94), Expect = 0.020
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +2
Query: 221 INKLTTTIAFILCFRFRXEVWEVFSALMNRPTRGERRFAYW 343
+++LT L RF V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.083
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 365 ERGSGRAPNTQTASPRALADSLMQ 294
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 39.1 bits (87), Expect = 0.14
Identities = 23/59 (38%), Positives = 26/59 (44%)
Frame = +3
Query: 681 RIPVPPFSPSGSVALSHXSXCXYLSSVXVVRSNLGCVXXPPVXPDRXALSGTYRLESTR 857
RIPVPPFS +GSVALSH S + + PP P T L TR
Sbjct: 55 RIPVPPFSLAGSVALSHSSHSGISARCRSFAPSWAVSKNPPFSPTAAPYPVTVHLSPTR 113
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 37.5 bits (83), Expect = 0.44
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -2
Query: 855 GWTQDDXXXXXXXXXXXRGVXAHSPGWSERXTPN*DT 745
GWTQ + RGV A+SP WSER TP+ DT
Sbjct: 9 GWTQVNSYRIRRSSRAERGVLAYSPAWSERPTPSRDT 45
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 37.1 bits (82), Expect = 0.58
Identities = 17/21 (80%), Positives = 17/21 (80%)
Frame = +3
Query: 699 FSPSGSVALSHXSXCXYLSSV 761
F PSGSVALSH S C YLSSV
Sbjct: 17 FLPSGSVALSHSSRCRYLSSV 37
Score = 35.1 bits (77), Expect = 2.3
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +1
Query: 652 RSPVPTLPLTGYLSRLSP 705
RSPVPTLPLTGYLS P
Sbjct: 2 RSPVPTLPLTGYLSAFLP 19
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 35.1 bits (77), Expect = 2.3
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +3
Query: 798 PPVXPDRXALSGTYRLES 851
PPV PDR ALSG YRLES
Sbjct: 4 PPVQPDRCALSGNYRLES 21
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.4
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -2
Query: 504 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 382
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 33.9 bits (74), Expect = 5.4
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Frame = +1
Query: 394 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 567
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 568 IDAQVRGGETRXGL*RYQAFP 630
I Q + +T+ FP
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFP 102
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.4
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -2
Query: 255 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 91
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_Q93CL0 Cluster: Variable surface lipoprotein Vsp422-9;
n=4; Mycoplasma bovis|Rep: Variable surface lipoprotein
Vsp422-9 - Mycoplasma bovis
Length = 313
Score = 33.5 bits (73), Expect = 7.2
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = -2
Query: 720 PRFXKGRKAGQVSGKRQGRNRRAXEGSXPGGKRLVSL*SXSGFATSDLSVDFCDARQGGG 541
PR KAGQ + G++ A G P GK S + SG + + S DA+ G
Sbjct: 186 PRQGTDAKAGQSPAGKSGQSTDAKSGQSPAGKSGQSTDAKSGQSPAGKSGQSTDAKSGQS 245
Query: 540 AYGKT 526
GK+
Sbjct: 246 PAGKS 250
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 760,413,604
Number of Sequences: 1657284
Number of extensions: 14032735
Number of successful extensions: 34527
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 33001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34493
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77882636090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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