Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_I20
(929 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26 pro... 155 2e-37
U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26 pro... 155 2e-37
BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26 p... 155 2e-37
BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26 p... 155 2e-37
BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26 p... 155 2e-37
BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26 p... 155 2e-37
BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26 p... 155 2e-37
X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26 pro... 153 7e-37
AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl... 153 9e-37
AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein. 148 3e-35
AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-l... 146 1e-34
AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26 p... 69 3e-11
AB007160-1|BAA25823.1| 23|Homo sapiens ribosomal protein S26 p... 41 0.006
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 7.9
U12767-1|AAB02581.1| 587|Homo sapiens mitogen induced nuclear o... 31 7.9
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 7.9
D85242-1|BAA31221.1| 143|Homo sapiens NOR-1 3'-variant protein. 31 7.9
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 7.9
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 7.9
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 7.9
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 7.9
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 7.9
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 7.9
>X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 155 bits (376), Expect = 2e-37
Identities = 70/88 (79%), Positives = 79/88 (89%)
Frame = +3
Query: 129 AKHGRGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 308
AK GRGHV+ + CTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ + LPKLY K
Sbjct: 11 AKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVK 70
Query: 309 LHYCVSCAIHSKVVRNRSKKDRRIRTPP 392
LHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 71 LHYCVSCAIHSKVVRNRSREARKDRTPP 98
>U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 155 bits (376), Expect = 2e-37
Identities = 70/88 (79%), Positives = 79/88 (89%)
Frame = +3
Query: 129 AKHGRGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 308
AK GRGHV+ + CTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ + LPKLY K
Sbjct: 11 AKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVK 70
Query: 309 LHYCVSCAIHSKVVRNRSKKDRRIRTPP 392
LHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 71 LHYCVSCAIHSKVVRNRSREARKDRTPP 98
>BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 155 bits (376), Expect = 2e-37
Identities = 70/88 (79%), Positives = 79/88 (89%)
Frame = +3
Query: 129 AKHGRGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 308
AK GRGHV+ + CTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ + LPKLY K
Sbjct: 11 AKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVK 70
Query: 309 LHYCVSCAIHSKVVRNRSKKDRRIRTPP 392
LHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 71 LHYCVSCAIHSKVVRNRSREARKDRTPP 98
>BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 155 bits (376), Expect = 2e-37
Identities = 70/88 (79%), Positives = 79/88 (89%)
Frame = +3
Query: 129 AKHGRGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 308
AK GRGHV+ + CTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ + LPKLY K
Sbjct: 11 AKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVK 70
Query: 309 LHYCVSCAIHSKVVRNRSKKDRRIRTPP 392
LHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 71 LHYCVSCAIHSKVVRNRSREARKDRTPP 98
>BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 155 bits (376), Expect = 2e-37
Identities = 70/88 (79%), Positives = 79/88 (89%)
Frame = +3
Query: 129 AKHGRGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 308
AK GRGHV+ + CTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ + LPKLY K
Sbjct: 11 AKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVK 70
Query: 309 LHYCVSCAIHSKVVRNRSKKDRRIRTPP 392
LHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 71 LHYCVSCAIHSKVVRNRSREARKDRTPP 98
>BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 155 bits (376), Expect = 2e-37
Identities = 70/88 (79%), Positives = 79/88 (89%)
Frame = +3
Query: 129 AKHGRGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 308
AK GRGHV+ + CTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ + LPKLY K
Sbjct: 11 AKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVK 70
Query: 309 LHYCVSCAIHSKVVRNRSKKDRRIRTPP 392
LHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 71 LHYCVSCAIHSKVVRNRSREARKDRTPP 98
>BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 155 bits (376), Expect = 2e-37
Identities = 70/88 (79%), Positives = 79/88 (89%)
Frame = +3
Query: 129 AKHGRGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 308
AK GRGHV+ + CTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ + LPKLY K
Sbjct: 11 AKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVK 70
Query: 309 LHYCVSCAIHSKVVRNRSKKDRRIRTPP 392
LHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 71 LHYCVSCAIHSKVVRNRSREARKDRTPP 98
>X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 153 bits (372), Expect = 7e-37
Identities = 69/88 (78%), Positives = 78/88 (88%)
Frame = +3
Query: 129 AKHGRGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 308
AK GRGHV+ + CTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+ + LPKLY K
Sbjct: 11 AKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVK 70
Query: 309 LHYCVSCAIHSKVVRNRSKKDRRIRTPP 392
LHYCVSC IHSKVVRNRS++ R+ RTPP
Sbjct: 71 LHYCVSCVIHSKVVRNRSREARKDRTPP 98
>AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl
Coenzyme A ).).
Length = 115
Score = 153 bits (371), Expect = 9e-37
Identities = 69/88 (78%), Positives = 78/88 (88%)
Frame = +3
Query: 129 AKHGRGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 308
AK GRGHV+ + CTNCARCVPKD AIKKFVIRNIVEAAAVRDI++ASV+ + LPKLY K
Sbjct: 11 AKKGRGHVQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVK 70
Query: 309 LHYCVSCAIHSKVVRNRSKKDRRIRTPP 392
LHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 71 LHYCVSCAIHSKVVRNRSREARKDRTPP 98
>AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein.
Length = 115
Score = 148 bits (358), Expect = 3e-35
Identities = 67/88 (76%), Positives = 76/88 (86%)
Frame = +3
Query: 129 AKHGRGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 308
AK GRGHV+ + CTNCARCVPKD AIKKFVIRNIVEAAAVRDI++ASV+ + LPKL K
Sbjct: 11 AKKGRGHVQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLCVK 70
Query: 309 LHYCVSCAIHSKVVRNRSKKDRRIRTPP 392
LHYCVSC IHSKVVRNRS++ R+ RTPP
Sbjct: 71 LHYCVSCVIHSKVVRNRSREARKDRTPP 98
>AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-like
1 protein.
Length = 115
Score = 146 bits (354), Expect = 1e-34
Identities = 66/88 (75%), Positives = 75/88 (85%)
Frame = +3
Query: 129 AKHGRGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 308
AK GRGHV+ + CTNC RCVP DKAIKKFVIRNIVEAAAVRDI++ SV+ + LPKLY K
Sbjct: 11 AKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFDAYVLPKLYVK 70
Query: 309 LHYCVSCAIHSKVVRNRSKKDRRIRTPP 392
LHYCVSCAIHSKVVRNRS++ + RTPP
Sbjct: 71 LHYCVSCAIHSKVVRNRSREACKDRTPP 98
>AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26
protein.
Length = 45
Score = 68.5 bits (160), Expect = 3e-11
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +3
Query: 282 FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 392
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 1 YVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 37
>AB007160-1|BAA25823.1| 23|Homo sapiens ribosomal protein S26
protein.
Length = 23
Score = 41.1 bits (92), Expect = 0.006
Identities = 19/22 (86%), Positives = 22/22 (100%)
Frame = +3
Query: 210 KFVIRNIVEAAAVRDINDASVY 275
KFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 KFVIRNIVEAAAVRDISEASVF 22
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 30.7 bits (66), Expect = 7.9
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 300 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 425
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>U12767-1|AAB02581.1| 587|Homo sapiens mitogen induced nuclear
orphan receptor protein.
Length = 587
Score = 30.7 bits (66), Expect = 7.9
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 300 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 425
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 307 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 350
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 30.7 bits (66), Expect = 7.9
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 300 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 425
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 404 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 447
>D85242-1|BAA31221.1| 143|Homo sapiens NOR-1 3'-variant protein.
Length = 143
Score = 30.7 bits (66), Expect = 7.9
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 300 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 425
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 46 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 89
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 30.7 bits (66), Expect = 7.9
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 300 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 425
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 30.7 bits (66), Expect = 7.9
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 300 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 425
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 30.7 bits (66), Expect = 7.9
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 300 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 425
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 30.7 bits (66), Expect = 7.9
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 300 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 425
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 357 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 400
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 30.7 bits (66), Expect = 7.9
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 300 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 425
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 30.7 bits (66), Expect = 7.9
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 300 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 425
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 357 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 400
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,135,720
Number of Sequences: 237096
Number of extensions: 1213346
Number of successful extensions: 2050
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2050
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12158972418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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