Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_I19
         (1022 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5KRM5 Cluster: Putative uncharacterized protein; n=1; ...    42   0.034
UniRef50_A2XPC7 Cluster: Putative uncharacterized protein; n=3; ...    29   4.5  
UniRef50_Q4RY48 Cluster: Chromosome 3 SCAF14978, whole genome sh...    34   5.1  
UniRef50_UPI00015B428D Cluster: PREDICTED: similar to splicing f...    28   7.4  
UniRef50_A0CS42 Cluster: Chromosome undetermined scaffold_26, wh...    27   7.6  
UniRef50_Q89KP2 Cluster: Bll4862 protein; n=4; Bradyrhizobiaceae...    33   9.0  
UniRef50_Q5A044 Cluster: Potential mitochondrial protein Fmp13; ...    27   9.7  

>UniRef50_A5KRM5 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus torques ATCC 27756|Rep: Putative
           uncharacterized protein - Ruminococcus torques ATCC
           27756
          Length = 159

 Score = 41.5 bits (93), Expect = 0.034
 Identities = 30/79 (37%), Positives = 31/79 (39%), Gaps = 9/79 (11%)
 Frame = -1

Query: 539 PPPPPXQXXXXXXFFFXXXX------FFFFPPP---PXKXXFFLXPPPXXPXXFFFFXXG 387
           PPPPP +      FFF          FFFFPPP   P    FF          FFF   G
Sbjct: 68  PPPPPLKKKKKIFFFFFKKRGGGGGFFFFFPPPQQNPPPFFFFFL----GFFLFFFKKRG 123

Query: 386 GFFFXKXXXXKKKXXFXPP 330
           G  F      KKK  F PP
Sbjct: 124 GGGFSPPPPKKKKIFFPPP 142


>UniRef50_A2XPC7 Cluster: Putative uncharacterized protein; n=3;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 402

 Score = 29.1 bits (62), Expect(2) = 4.5
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -2

Query: 586 PPXPFFXXXXXXXXXPPPPPPP 521
           PP P +         PPPPPPP
Sbjct: 364 PPPPVYYSSYVMLDRPPPPPPP 385



 Score = 24.2 bits (50), Expect(2) = 4.5
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -2

Query: 541 PPPPPPPK 518
           PPPPPPP+
Sbjct: 382 PPPPPPPQ 389


>UniRef50_Q4RY48 Cluster: Chromosome 3 SCAF14978, whole genome shotgun
            sequence; n=5; Euteleostomi|Rep: Chromosome 3 SCAF14978,
            whole genome shotgun sequence - Tetraodon nigroviridis
            (Green puffer)
          Length = 1449

 Score = 34.3 bits (75), Expect = 5.1
 Identities = 17/42 (40%), Positives = 17/42 (40%)
 Frame = -1

Query: 539  PPPPPXQXXXXXXFFFXXXXFFFFPPPPXKXXFFLXPPPXXP 414
            PPPPP        F         FPPPP     FL PPP  P
Sbjct: 958  PPPPPPPPPPQQQFQLPSQ----FPPPPPTARIFLRPPPTLP 995


>UniRef50_UPI00015B428D Cluster: PREDICTED: similar to splicing
           factor yt521-b; n=1; Nasonia vitripennis|Rep: PREDICTED:
           similar to splicing factor yt521-b - Nasonia vitripennis
          Length = 556

 Score = 27.9 bits (59), Expect(2) = 7.4
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -2

Query: 586 PPXPFFXXXXXXXXXPPPPPPP 521
           PP P +         PPPPPPP
Sbjct: 391 PPLPPYVASLPYDTLPPPPPPP 412



 Score = 24.6 bits (51), Expect(2) = 7.4
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -2

Query: 541 PPPPPPPK 518
           PPPPPPP+
Sbjct: 408 PPPPPPPR 415


>UniRef50_A0CS42 Cluster: Chromosome undetermined scaffold_26, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_26,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 417

 Score = 26.6 bits (56), Expect(2) = 7.6
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -2

Query: 586 PPXPFFXXXXXXXXXPPPPPPP 521
           PP P           PPPPPPP
Sbjct: 273 PPAPSAKGGAPPPPPPPPPPPP 294



 Score = 25.8 bits (54), Expect(2) = 7.6
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -2

Query: 541 PPPPPPPK 518
           PPPPPPPK
Sbjct: 294 PPPPPPPK 301


>UniRef50_Q89KP2 Cluster: Bll4862 protein; n=4;
           Bradyrhizobiaceae|Rep: Bll4862 protein - Bradyrhizobium
           japonicum
          Length = 887

 Score = 33.5 bits (73), Expect = 9.0
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = -1

Query: 539 PPPPPXQXXXXXX--FFFXXXXFFFFPPPPXKXXFFLXPPP 423
           PPPPP +         +F    F F PPPP    ++L PPP
Sbjct: 435 PPPPPEEVVYVDRPVLYFSDPDFGFAPPPP-PPVYYLPPPP 474


>UniRef50_Q5A044 Cluster: Potential mitochondrial protein Fmp13;
           n=5; Saccharomycetales|Rep: Potential mitochondrial
           protein Fmp13 - Candida albicans (Yeast)
          Length = 567

 Score = 27.1 bits (57), Expect(2) = 9.7
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -2

Query: 541 PPPPPPPKXXXXXXFFF 491
           PPPPPPPK      F F
Sbjct: 52  PPPPPPPKAKRFSLFGF 68



 Score = 25.0 bits (52), Expect(2) = 9.7
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -2

Query: 586 PPXPFFXXXXXXXXXPPPPPPP 521
           PP P           PPPPPPP
Sbjct: 34  PPVPPPVKPQRSEIPPPPPPPP 55


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 374,574,996
Number of Sequences: 1657284
Number of extensions: 6817257
Number of successful extensions: 85537
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53065
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 97572067153
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)