Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_I19
(1022 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1147 + 24349811-24350161,24351031-24351366,24353260-243533... 27 0.37
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 27 0.50
03_04_0042 - 16743440-16743454,16743907-16744002,16744257-167444... 25 1.9
01_06_0090 + 26358051-26359157,26359582-26359701,26359968-263600... 27 2.4
12_02_0299 - 17051570-17052474,17053542-17053755 30 2.6
08_02_1143 + 24659105-24659386,24660171-24660272,24661259-246615... 25 3.8
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 26 4.0
01_06_1523 + 37976184-37976633,37977757-37977884,37978541-37978688 29 4.5
08_02_0796 - 21300251-21300373,21300846-21301721 27 5.4
02_05_0149 + 26290236-26290880 24 7.4
02_05_0686 - 30900748-30902167,30903442-30904742 24 8.4
>07_03_1147 +
24349811-24350161,24351031-24351366,24353260-24353376,
24353585-24353647,24354066-24354139,24354216-24354306,
24354791-24354850,24355270-24355462,24356242-24356522,
24357435-24357536,24357664-24357774,24358410-24358475,
24358562-24358660,24358757-24358788,24359171-24359274,
24359380-24359507,24359625-24359756,24360051-24360359,
24360887-24361071,24361161-24361263,24361407-24361552,
24361748-24361827,24361901-24362103
Length = 1121
Score = 27.5 bits (58), Expect(2) = 0.37
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -2
Query: 586 PPXPFFXXXXXXXXXPPPPPPP 521
PP P PPPPPPP
Sbjct: 49 PPQPTLPPPPPRTLPPPPPPPP 70
Score = 24.2 bits (50), Expect(2) = 0.37
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2
Query: 541 PPPPPPPK 518
PPPPPPP+
Sbjct: 65 PPPPPPPQ 72
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 26.6 bits (56), Expect(2) = 0.50
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -2
Query: 586 PPXPFFXXXXXXXXXPPPPPPP 521
PP P PPPPPPP
Sbjct: 64 PPLPSATPPLAASPPPPPPPPP 85
Score = 24.6 bits (51), Expect(2) = 0.50
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2
Query: 541 PPPPPPPK 518
PPPPPPP+
Sbjct: 80 PPPPPPPR 87
>03_04_0042 -
16743440-16743454,16743907-16744002,16744257-16744475,
16744830-16744910,16745092-16745187,16745981-16746045,
16746131-16746217,16746522-16746720
Length = 285
Score = 25.0 bits (52), Expect(2) = 1.9
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -2
Query: 586 PPXPFFXXXXXXXXXPPPPPPP 521
PP PPPPPPP
Sbjct: 3 PPTALLPGRSAAPRPPPPPPPP 24
Score = 24.2 bits (50), Expect(2) = 1.9
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2
Query: 541 PPPPPPPK 518
PPPPPPP+
Sbjct: 19 PPPPPPPQ 26
>01_06_0090 +
26358051-26359157,26359582-26359701,26359968-26360099,
26360194-26360375,26360488-26360602,26362001-26362135,
26362261-26362395
Length = 641
Score = 27.5 bits (58), Expect(2) = 2.4
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -2
Query: 586 PPXPFFXXXXXXXXXPPPPPPP 521
PP P PPPPPPP
Sbjct: 276 PPMPALSVCGRAAAPPPPPPPP 297
Score = 21.4 bits (43), Expect(2) = 2.4
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -2
Query: 541 PPPPPPPK 518
PPPPPP +
Sbjct: 293 PPPPPPAR 300
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 30.3 bits (65), Expect = 2.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 586 PPXPFFXXXXXXXXXPPPPPPP 521
PP P F PPPPPPP
Sbjct: 305 PPLPHFPPLPSFYPSPPPPPPP 326
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 586 PPXPFFXXXXXXXXXPPPPPPP 521
PP P F PPPPPPP
Sbjct: 311 PPLPSFYPSPPPPPPPPPPPPP 332
>08_02_1143 +
24659105-24659386,24660171-24660272,24661259-24661521,
24661775-24661874,24662080-24662238,24662327-24663147,
24663299-24663618,24665831-24667398
Length = 1204
Score = 24.6 bits (51), Expect(2) = 3.8
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2
Query: 541 PPPPPPPK 518
PPPPPPP+
Sbjct: 723 PPPPPPPR 730
Score = 23.4 bits (48), Expect(2) = 3.8
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = -2
Query: 586 PPXPFFXXXXXXXXXPPPPPP 524
PP P PPPPPP
Sbjct: 709 PPSPPHLRIPRPWPPPPPPPP 729
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 26.2 bits (55), Expect(2) = 4.0
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -2
Query: 586 PPXPFFXXXXXXXXXPPPPPPP 521
PP P PPPPPPP
Sbjct: 236 PPKPANIAGAPGLPLPPPPPPP 257
Score = 21.8 bits (44), Expect(2) = 4.0
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -2
Query: 538 PPPPPPK 518
PPPPPP+
Sbjct: 273 PPPPPPR 279
>01_06_1523 + 37976184-37976633,37977757-37977884,37978541-37978688
Length = 241
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 456 GGGGKKKKXXXXKKKXXXXXXLGGGGGG 539
GGGG+++ KK GGGGGG
Sbjct: 41 GGGGRRRGSKRWSKKRAGRGGYGGGGGG 68
>08_02_0796 - 21300251-21300373,21300846-21301721
Length = 332
Score = 26.6 bits (56), Expect(2) = 5.4
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -2
Query: 586 PPXPFFXXXXXXXXXPPPPPPP 521
PP P PPPPPPP
Sbjct: 94 PPSPPLLALPPPPPPPPPPPPP 115
Score = 21.0 bits (42), Expect(2) = 5.4
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -2
Query: 541 PPPPPPPK 518
PPPPP P+
Sbjct: 112 PPPPPQPQ 119
>02_05_0149 + 26290236-26290880
Length = 214
Score = 23.8 bits (49), Expect(2) = 7.4
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +3
Query: 456 GGGGKKKKXXXXKKKXXXXXXLGGGGGGG 542
GGGG + GGGGGGG
Sbjct: 109 GGGGSGRAYGFGGGYGGHPGGFGGGGGGG 137
Score = 23.4 bits (48), Expect(2) = 7.4
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 522 GGGGGGGXXXXXXXXKKXGXGG 587
GGGGGGG G GG
Sbjct: 133 GGGGGGGGGGRNYGGGSGGIGG 154
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 23.8 bits (49), Expect(2) = 8.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 541 PPPPPPP 521
PPPPPPP
Sbjct: 364 PPPPPPP 370
Score = 23.0 bits (47), Expect(2) = 8.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 538 PPPPPPK 518
PPPPPPK
Sbjct: 377 PPPPPPK 383
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,477,377
Number of Sequences: 37544
Number of extensions: 344512
Number of successful extensions: 10668
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7341
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3001039372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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