BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP04_F_I19 (1022 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 24 3.4 AF003139-7|AAB54162.2| 512|Caenorhabditis elegans Defective spe... 26 4.7 AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical ... 29 5.3 AC006611-4|AAK85456.2| 328|Caenorhabditis elegans Hypothetical ... 29 7.1 AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 24 7.5 AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 24 7.6 AL110485-18|CAB60366.1| 108|Caenorhabditis elegans Hypothetical... 28 9.3 AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 28 9.3 >Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical protein F15B9.4 protein. Length = 1140 Score = 24.2 bits (50), Expect(2) = 3.4 Identities = 9/21 (42%), Positives = 9/21 (42%) Frame = -2 Query: 586 PPXPFFXXXXXXXXXPPPPPP 524 PP P PPPPPP Sbjct: 523 PPMPGMAPLSTGAPTPPPPPP 543 Score = 23.8 bits (49), Expect(2) = 3.4 Identities = 7/7 (100%), Positives = 7/7 (100%) Frame = -2 Query: 541 PPPPPPP 521 PPPPPPP Sbjct: 579 PPPPPPP 585 >AF003139-7|AAB54162.2| 512|Caenorhabditis elegans Defective spermatogenesis protein 8 protein. Length = 512 Score = 25.8 bits (54), Expect(2) = 4.7 Identities = 8/8 (100%), Positives = 8/8 (100%) Frame = -2 Query: 541 PPPPPPPK 518 PPPPPPPK Sbjct: 70 PPPPPPPK 77 Score = 21.8 bits (44), Expect(2) = 4.7 Identities = 8/20 (40%), Positives = 8/20 (40%) Frame = -2 Query: 583 PXPFFXXXXXXXXXPPPPPP 524 P P PPPPPP Sbjct: 57 PTPLTPAITPCEAPPPPPPP 76 >AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical protein H31G24.1 protein. Length = 109 Score = 29.1 bits (62), Expect = 5.3 Identities = 10/23 (43%), Positives = 12/23 (52%) Frame = -2 Query: 586 PPXPFFXXXXXXXXXPPPPPPPK 518 PP P+ PPPPPPP+ Sbjct: 71 PPQPYAQSPIAAVPPPPPPPPPQ 93 >AC006611-4|AAK85456.2| 328|Caenorhabditis elegans Hypothetical protein C30F8.3 protein. Length = 328 Score = 28.7 bits (61), Expect = 7.1 Identities = 10/22 (45%), Positives = 11/22 (50%) Frame = -2 Query: 586 PPXPFFXXXXXXXXXPPPPPPP 521 PP P + PPPPPPP Sbjct: 58 PPPPAYPFAPQVFTQPPPPPPP 79 >AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily assigned gene nameprotein 343, isoform a protein. Length = 996 Score = 23.8 bits (49), Expect(2) = 7.5 Identities = 9/21 (42%), Positives = 9/21 (42%) Frame = -2 Query: 586 PPXPFFXXXXXXXXXPPPPPP 524 PP P PPPPPP Sbjct: 298 PPPPLPLSNPPAKPTPPPPPP 318 Score = 23.0 bits (47), Expect(2) = 7.5 Identities = 7/7 (100%), Positives = 7/7 (100%) Frame = -2 Query: 538 PPPPPPK 518 PPPPPPK Sbjct: 313 PPPPPPK 319 >AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily assigned gene nameprotein 343, isoform b protein. Length = 774 Score = 23.8 bits (49), Expect(2) = 7.6 Identities = 9/21 (42%), Positives = 9/21 (42%) Frame = -2 Query: 586 PPXPFFXXXXXXXXXPPPPPP 524 PP P PPPPPP Sbjct: 76 PPPPLPLSNPPAKPTPPPPPP 96 Score = 23.0 bits (47), Expect(2) = 7.6 Identities = 7/7 (100%), Positives = 7/7 (100%) Frame = -2 Query: 538 PPPPPPK 518 PPPPPPK Sbjct: 91 PPPPPPK 97 >AL110485-18|CAB60366.1| 108|Caenorhabditis elegans Hypothetical protein Y46G5A.23 protein. Length = 108 Score = 28.3 bits (60), Expect = 9.3 Identities = 14/43 (32%), Positives = 18/43 (41%) Frame = +3 Query: 456 GGGGKKKKXXXXKKKXXXXXXLGGGGGGGXXXXXXXXKKXGXG 584 GGGG + ++ LGGGGGGG + G G Sbjct: 43 GGGGDSCEDGGEQQVVLIGQVLGGGGGGGGRRHHRGHRHGGGG 85 >AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily assigned gene nameprotein 268 protein. Length = 881 Score = 28.3 bits (60), Expect = 9.3 Identities = 10/22 (45%), Positives = 10/22 (45%) Frame = -2 Query: 586 PPXPFFXXXXXXXXXPPPPPPP 521 PP P PPPPPPP Sbjct: 72 PPPPLISILQQAPPPPPPPPPP 93 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 8,919,398 Number of Sequences: 27780 Number of extensions: 178746 Number of successful extensions: 2549 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 558 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1496 length of database: 12,740,198 effective HSP length: 82 effective length of database: 10,462,238 effective search space used: 2699257404 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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