Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_I19
(1022 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 27 0.18
At4g33660.1 68417.m04781 expressed protein 27 0.54
At5g19800.1 68418.m02353 hydroxyproline-rich glycoprotein family... 31 1.6
At3g53330.1 68416.m05884 plastocyanin-like domain-containing pro... 26 2.1
At1g21310.1 68414.m02662 proline-rich extensin-like family prote... 30 2.8
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 29 3.7
At4g23140.2 68417.m03338 receptor-like protein kinase 5 (RLK5) i... 25 5.5
At4g23140.1 68417.m03337 receptor-like protein kinase 5 (RLK5) i... 25 5.5
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 29 6.5
At3g50180.1 68416.m05486 hypothetical protein 25 7.2
At5g48385.1 68418.m05980 expressed protein 24 7.3
At1g72600.1 68414.m08395 hydroxyproline-rich glycoprotein family... 24 8.5
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 28 8.7
At4g08410.1 68417.m01390 proline-rich extensin-like family prote... 28 8.7
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 26.6 bits (56), Expect(2) = 3.1
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -2
Query: 586 PPXPFFXXXXXXXXXPPPPPPP 521
PP P PPPPPPP
Sbjct: 604 PPPPSSRSIPSPSAPPPPPPPP 625
Score = 26.6 bits (56), Expect(2) = 0.18
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -2
Query: 586 PPXPFFXXXXXXXXXPPPPPPP 521
PP P F PPPPPP
Sbjct: 623 PPPPSFGSTGNKRQAQPPPPPP 644
Score = 25.8 bits (54), Expect(2) = 0.18
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 541 PPPPPPPK 518
PPPPPPPK
Sbjct: 682 PPPPPPPK 689
Score = 21.4 bits (43), Expect(2) = 3.1
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -2
Query: 541 PPPPPPPK 518
PPPPPP +
Sbjct: 643 PPPPPPTR 650
>At4g33660.1 68417.m04781 expressed protein
Length = 76
Score = 26.6 bits (56), Expect(2) = 0.54
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -2
Query: 586 PPXPFFXXXXXXXXXPPPPPPP 521
PP P PPPPPPP
Sbjct: 20 PPPPVGVPPQYYPPPPPPPPPP 41
Score = 24.6 bits (51), Expect(2) = 0.54
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2
Query: 541 PPPPPPPK 518
PPPPPPP+
Sbjct: 38 PPPPPPPR 45
>At5g19800.1 68418.m02353 hydroxyproline-rich glycoprotein family
protein similar to extensin [Catharanthus roseus]
gi|1486263|dbj|BAA13175; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 96
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/57 (29%), Positives = 20/57 (35%)
Frame = -1
Query: 593 FXPPXPXFFXXXXXXXXXPPPPPXQXXXXXXFFFXXXXFFFFPPPPXKXXFFLXPPP 423
+ PP P + PPPPP Q + PPPP K PPP
Sbjct: 35 YSPPPPPVYSPPISPPPPPPPPPPQSHAAAYKRYSP------PPPPSKYGRVYPPPP 85
>At3g53330.1 68416.m05884 plastocyanin-like domain-containing
protein similar to mavicyanin SP:P80728 from [Cucurbita
pepo]
Length = 310
Score = 26.2 bits (55), Expect(2) = 2.1
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -2
Query: 586 PPXPFFXXXXXXXXXPPPPPPP 521
PP P PPPPPPP
Sbjct: 140 PPPPSKTHEPSRPNTPPPPPPP 161
Score = 22.6 bits (46), Expect(2) = 2.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 541 PPPPPPPK 518
PPPPPP K
Sbjct: 156 PPPPPPSK 163
>At1g21310.1 68414.m02662 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 431
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -1
Query: 536 PPPPXQXXXXXXFFFXXXXFFFFPPPPXKXXFFLXPPP 423
PPPP + + + PPPP K + PPP
Sbjct: 34 PPPPVKHYTPPVKHYSPPPVYHSPPPPKKHYEYKSPPP 71
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/61 (26%), Positives = 21/61 (34%)
Frame = -1
Query: 587 PPXPXFFXXXXXXXXXPPPPPXQXXXXXXFFFXXXXFFFFPPPPXKXXFFLXPPPXXPXX 408
PP P PPPPP + + PPPP ++ PPP P
Sbjct: 379 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPYVYPSP-----PPPPPSPPPYVYPPPPPPYV 433
Query: 407 F 405
+
Sbjct: 434 Y 434
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/63 (23%), Positives = 21/63 (33%)
Frame = -1
Query: 587 PPXPXFFXXXXXXXXXPPPPPXQXXXXXXFFFXXXXFFFFPPPPXKXXFFLXPPPXXPXX 408
PP P P PPP + + +PPPP + PPP P
Sbjct: 395 PPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPPPYVYPPPP-SPPYVYPPPPPSPQP 453
Query: 407 FFF 399
+ +
Sbjct: 454 YMY 456
>At4g23140.2 68417.m03338 receptor-like protein kinase 5 (RLK5)
identical to receptor-like protein kinase 5 [Arabidopsis
thaliana] GI:13506747; contains Pfam domain PF00069:
Protein kinase domain; identical to cDNA receptor-like
protein kinase 5 (RLK5) GI:13506746
Length = 680
Score = 24.6 bits (51), Expect(2) = 5.5
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2
Query: 541 PPPPPPPK 518
PPPPPPP+
Sbjct: 259 PPPPPPPR 266
Score = 22.6 bits (46), Expect(2) = 5.5
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = -2
Query: 577 PFFXXXXXXXXXPPPPPPP 521
PF+ PPPPPP
Sbjct: 244 PFYNESAIETPPLPPPPPP 262
>At4g23140.1 68417.m03337 receptor-like protein kinase 5 (RLK5)
identical to receptor-like protein kinase 5 [Arabidopsis
thaliana] GI:13506747; contains Pfam domain PF00069:
Protein kinase domain; identical to cDNA receptor-like
protein kinase 5 (RLK5) GI:13506746
Length = 674
Score = 24.6 bits (51), Expect(2) = 5.5
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2
Query: 541 PPPPPPPK 518
PPPPPPP+
Sbjct: 259 PPPPPPPR 266
Score = 22.6 bits (46), Expect(2) = 5.5
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = -2
Query: 577 PFFXXXXXXXXXPPPPPPP 521
PF+ PPPPPP
Sbjct: 244 PFYNESAIETPPLPPPPPP 262
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/59 (23%), Positives = 20/59 (33%), Gaps = 2/59 (3%)
Frame = -1
Query: 593 FXPPXPXFFXXXXXXXXXPPPPPX--QXXXXXXFFFXXXXFFFFPPPPXKXXFFLXPPP 423
+ PP P + PPPPP + + + PPP + PPP
Sbjct: 439 YSPPPPPYSKMSPSVRAYPPPPPPSPSPPPPYVYSSPPPPYVYSSPPPPPYVYSSPPPP 497
>At3g50180.1 68416.m05486 hypothetical protein
Length = 588
Score = 24.6 bits (51), Expect(2) = 7.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2
Query: 541 PPPPPPPK 518
PPPPPPP+
Sbjct: 36 PPPPPPPR 43
Score = 22.2 bits (45), Expect(2) = 7.2
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -2
Query: 586 PPXPFFXXXXXXXXXPPPPPPP 521
PP P PP PPPP
Sbjct: 11 PPLPPRLELRRQRAPPPQPPPP 32
>At5g48385.1 68418.m05980 expressed protein
Length = 558
Score = 24.2 bits (50), Expect(2) = 7.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2
Query: 541 PPPPPPPK 518
PPPPPPP+
Sbjct: 521 PPPPPPPQ 528
Score = 22.6 bits (46), Expect(2) = 7.3
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = -2
Query: 577 PFFXXXXXXXXXPPPPPP 524
PF PPPPPP
Sbjct: 510 PFLSGPIMAAQPPPPPPP 527
>At1g72600.1 68414.m08395 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 135
Score = 23.8 bits (49), Expect(2) = 8.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 541 PPPPPPP 521
PPPPPPP
Sbjct: 39 PPPPPPP 45
Score = 23.0 bits (47), Expect(2) = 8.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 538 PPPPPPK 518
PPPPPPK
Sbjct: 85 PPPPPPK 91
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = -3
Query: 585 PPPXFFXXXXXXXXXPPPPPXPXXXXXXXFFXXXXFFFFSPPP 457
PPP PPPPP P F + PPP
Sbjct: 543 PPPPVHSPPPPPVYSPPPPPPPVHSPPPPVFSPPPPVYSPPPP 585
>At4g08410.1 68417.m01390 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965;
Length = 707
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/56 (21%), Positives = 19/56 (33%)
Frame = -3
Query: 594 FXXPPPXFFXXXXXXXXXPPPPPXPXXXXXXXFFXXXXFFFFSPPPXXKXFFFVXP 427
+ PPP ++ PPPPP ++ + PP + F P
Sbjct: 457 YSSPPPPYYSPSPKVDYKPPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYSFPPP 512
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,419,998
Number of Sequences: 28952
Number of extensions: 191078
Number of successful extensions: 4079
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2359
length of database: 12,070,560
effective HSP length: 82
effective length of database: 9,696,496
effective search space used: 2501695968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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