BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP04_F_I17 (1017 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 30 0.096 AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 28 0.51 AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 27 0.68 AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 26 1.6 AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 26 2.1 AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 25 2.7 AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP prot... 25 2.7 AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled ... 24 8.4 AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein... 24 8.4 >DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. Length = 889 Score = 30.3 bits (65), Expect = 0.096 Identities = 16/41 (39%), Positives = 17/41 (41%) Frame = +1 Query: 661 PPXRPXPXPXXPFPPGPPXXPXXXXXYPPRXPPXXXLPPLP 783 P +P P P P P GPP P P P PPLP Sbjct: 577 PNAQPPPAPPPPPPMGPPPSPLAGG---PLGGPAGSRPPLP 614 Score = 25.0 bits (52), Expect = 3.6 Identities = 12/31 (38%), Positives = 13/31 (41%) Frame = +1 Query: 619 KXPXXLXAXP*APAPPXRPXPXPXXPFPPGP 711 + P P A PP P P P P PP P Sbjct: 568 RFPAGFPNLPNAQPPPAPPPPPPMGP-PPSP 597 Score = 23.8 bits (49), Expect = 8.4 Identities = 13/40 (32%), Positives = 13/40 (32%) Frame = +1 Query: 664 PXRPXPXPXXPFPPGPPXXPXXXXXYPPRXPPXXXLPPLP 783 P P FP G P P P PP PP P Sbjct: 558 PFFPLNPAQLRFPAGFPNLPNAQPPPAPPPPPPMGPPPSP 597 >AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein protein. Length = 596 Score = 27.9 bits (59), Expect = 0.51 Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 1/32 (3%) Frame = -2 Query: 785 GGKGGRXXXGGXRG-GYXXXXXGXXGGPGGKG 693 GG+GGR GG RG G GG GG G Sbjct: 67 GGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGG 98 Score = 23.8 bits (49), Expect = 8.4 Identities = 12/34 (35%), Positives = 14/34 (41%) Frame = -2 Query: 785 GGKGGRXXXGGXRGGYXXXXXGXXGGPGGKGXXG 684 GG+GG G RGG GG G + G Sbjct: 73 GGRGGGRGRGRGRGGRDGGGGFGGGGYGDRNGDG 106 >AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule binding protein protein. Length = 838 Score = 27.5 bits (58), Expect = 0.68 Identities = 14/40 (35%), Positives = 15/40 (37%) Frame = +1 Query: 658 APPXRPXPXPXXPFPPGPPXXPXXXXXYPPRXPPXXXLPP 777 APP RP P F P P P + PP L P Sbjct: 101 APPARPSQPPTTRFAPEPRAEVKFVPSVPLKTPPVRPLLP 140 Score = 25.0 bits (52), Expect = 3.6 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = +3 Query: 936 PPRVVGXFPTPPXXPXXXPPAPXLP 1010 PPR G +P PP P P P +P Sbjct: 211 PPRPGGMYPQPPGVP--MPMRPQMP 233 >AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific transcription factor FRU-MA protein. Length = 960 Score = 26.2 bits (55), Expect = 1.6 Identities = 12/27 (44%), Positives = 13/27 (48%) Frame = -3 Query: 1015 GXGXXGAGGXXXGXXGGVGKXPTTRGG 935 G G GAGG G GG G + GG Sbjct: 838 GAGGGGAGGPLRGSSGGAGGGSSGGGG 864 Score = 25.8 bits (54), Expect = 2.1 Identities = 12/29 (41%), Positives = 12/29 (41%) Frame = -2 Query: 785 GGKGGRXXXGGXRGGYXXXXXGXXGGPGG 699 GG G G RGG G GG GG Sbjct: 540 GGSDGPEYEGAGRGGVGSGIGGGGGGGGG 568 >AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine protease protein. Length = 1322 Score = 25.8 bits (54), Expect = 2.1 Identities = 11/30 (36%), Positives = 12/30 (40%) Frame = +1 Query: 670 RPXPXPXXPFPPGPPXXPXXXXXYPPRXPP 759 +P P P P P P PPR PP Sbjct: 377 QPVPAVVNPQQPSRPTIPAPQQQTPPRQPP 406 >AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. Length = 1132 Score = 25.4 bits (53), Expect = 2.7 Identities = 11/25 (44%), Positives = 12/25 (48%) Frame = -3 Query: 1015 GXGXXGAGGXXXGXXGGVGKXPTTR 941 G G G GG G G +G TTR Sbjct: 545 GVGGGGGGGGGGGGGGVIGSGSTTR 569 >AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP protein. Length = 151 Score = 25.4 bits (53), Expect = 2.7 Identities = 12/39 (30%), Positives = 14/39 (35%) Frame = +1 Query: 664 PXRPXPXPXXPFPPGPPXXPXXXXXYPPRXPPXXXLPPL 780 P P P P GP P PP P +PP+ Sbjct: 93 PGMPGAPPLLMGPNGPLPPPMMGMRPPPMMVPTMGMPPM 131 Score = 24.2 bits (50), Expect = 6.3 Identities = 13/41 (31%), Positives = 13/41 (31%) Frame = +1 Query: 655 PAPPXRPXPXPXXPFPPGPPXXPXXXXXYPPRXPPXXXLPP 777 P P P P PP P P P P LPP Sbjct: 71 PPKPNISIPPPTMNMPPRPGMIPGMPGAPPLLMGPNGPLPP 111 >AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled receptor protein. Length = 611 Score = 23.8 bits (49), Expect = 8.4 Identities = 9/19 (47%), Positives = 10/19 (52%) Frame = -3 Query: 1015 GXGXXGAGGXXXGXXGGVG 959 G G G GG G GG+G Sbjct: 554 GGGGGGGGGGGGGVGGGIG 572 >AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein coupled receptor protein. Length = 612 Score = 23.8 bits (49), Expect = 8.4 Identities = 9/19 (47%), Positives = 10/19 (52%) Frame = -3 Query: 1015 GXGXXGAGGXXXGXXGGVG 959 G G G GG G GG+G Sbjct: 555 GGGGGGGGGGGGGVGGGIG 573 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 453,794 Number of Sequences: 2352 Number of extensions: 5605 Number of successful extensions: 42 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 36 length of database: 563,979 effective HSP length: 65 effective length of database: 411,099 effective search space used: 112230027 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -