Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_I16
(916 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42530| Best HMM Match : ELFV_dehydrog_N (HMM E-Value=0) 135 4e-32
SB_52096| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_43845| Best HMM Match : ELFV_dehydrog (HMM E-Value=0) 44 1e-04
SB_29491| Best HMM Match : ELFV_dehydrog (HMM E-Value=0) 44 1e-04
SB_14929| Best HMM Match : ELFV_dehydrog_N (HMM E-Value=6.4e-08) 37 0.020
SB_25509| Best HMM Match : PWP2 (HMM E-Value=4.4) 36 0.060
SB_39930| Best HMM Match : Keratin_B2 (HMM E-Value=0.25) 34 0.18
SB_47331| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_24841| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
>SB_42530| Best HMM Match : ELFV_dehydrog_N (HMM E-Value=0)
Length = 520
Score = 135 bits (327), Expect = 4e-32
Identities = 65/132 (49%), Positives = 89/132 (67%), Gaps = 4/132 (3%)
Frame = +2
Query: 383 IPTSANPKFFHMVEYFFHRACQVVEDKLVE--DLKSRTP--IEEKKKKVAGILKLMEPCD 550
+ + P F M FF +A VE +L+ D + P E+KK ++ GIL +M+PC
Sbjct: 38 VESDTEPSFTEMCAGFFDQARTYVEHRLLTRPDPPGKIPEKFEDKKHRIKGILDVMKPCQ 97
Query: 551 HILEIQFPLRRDSGDYEMILGYRAQXSTHRTPXKGGIRFSXDVTRDEVKALSXLMTFKCA 730
+L + FP++ D+G+Y+++ GYRAQ S HR+P KGGIR+S DV DEV+AL+ LMTFKCA
Sbjct: 98 DVLSVVFPIKLDNGEYKLVQGYRAQHSHHRSPCKGGIRYSEDVDIDEVQALATLMTFKCA 157
Query: 731 CVDVPFGGAKXG 766
VDVPFGGAK G
Sbjct: 158 VVDVPFGGAKGG 169
>SB_52096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 997
Score = 48.0 bits (109), Expect = 1e-05
Identities = 24/79 (30%), Positives = 40/79 (50%)
Frame = +2
Query: 530 KLMEPCDHILEIQFPLRRDSGDYEMILGYRAQXSTHRTPXKGGIRFSXDVTRDEVKALSX 709
+++EP + +L + P D G+ ++ GYR + ++ P KGG+RF V +K L
Sbjct: 379 RIVEP-ERVLSFRVPWLDDKGEVQVNRGYRVEFNSSIGPYKGGLRFHPSVNLGILKFLGF 437
Query: 710 LMTFKCACVDVPFGGAKXG 766
K + +P GG K G
Sbjct: 438 EQVLKNSLTTLPMGGGKGG 456
>SB_43845| Best HMM Match : ELFV_dehydrog (HMM E-Value=0)
Length = 448
Score = 44.4 bits (100), Expect = 1e-04
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +2
Query: 518 AGIL-KLMEPCDHILEIQFPLRRDSGDYEMILGYRAQXSTHRTPXKGGIRFSXDVTRDEV 694
A IL +++EP + ++ + P R DS + + G+R + ++ P KGG+RF V +
Sbjct: 47 ANILDRIVEP-ERVVIFRVPWRDDSNNIRVNRGFRVEFNSTIGPYKGGLRFHPTVNLGIL 105
Query: 695 KALSXLMTFKCACVDVPFGGAKXG 766
K L K + +P GG K G
Sbjct: 106 KFLGFEQVLKNSLTTLPLGGGKGG 129
>SB_29491| Best HMM Match : ELFV_dehydrog (HMM E-Value=0)
Length = 486
Score = 44.4 bits (100), Expect = 1e-04
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +2
Query: 518 AGIL-KLMEPCDHILEIQFPLRRDSGDYEMILGYRAQXSTHRTPXKGGIRFSXDVTRDEV 694
A IL +++EP + ++ + P R DS + + G+R + ++ P KGG+RF V +
Sbjct: 85 ANILDRIVEP-ERVVIFRVPWRDDSNNIRVNRGFRVEFNSTIGPYKGGLRFHPTVNLGIL 143
Query: 695 KALSXLMTFKCACVDVPFGGAKXG 766
K L K + +P GG K G
Sbjct: 144 KFLGFEQVLKNSLTTLPLGGGKGG 167
>SB_14929| Best HMM Match : ELFV_dehydrog_N (HMM E-Value=6.4e-08)
Length = 131
Score = 37.1 bits (82), Expect = 0.020
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +2
Query: 530 KLMEPCDHILEIQFPLRRDSGDYEMILGYRAQXSTHRTPXKGGIRFSXDVTRDEVKAL 703
+++EP + +L + P D G+ ++ GYR + ++ P KGG+RF V +K L
Sbjct: 71 RIVEP-ERVLSFRVPWLDDKGEVQVNRGYRVEFNSSIGPYKGGLRFHPSVNLGILKFL 127
>SB_25509| Best HMM Match : PWP2 (HMM E-Value=4.4)
Length = 582
Score = 35.5 bits (78), Expect = 0.060
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Frame = +2
Query: 344 TYASHEIPDKLKDIPTSANPKFFHMVEYFFHR--ACQVVEDKLVEDLKSRTPIEEKKKKV 517
TY+ E+ D L++ +S FH+ + HR +++ + V+D K +TP E KK
Sbjct: 334 TYSQSELMD-LRNNSSSLTD--FHI--FCLHRWLPANLLKPEAVKDAKKQTPDLEFKKWT 388
Query: 518 AGILKLMEPCDHILEIQFPLRRDSGDYEMILGYRAQXSTHRT 643
GIL I E+ PL+R+ + Y+AQ H T
Sbjct: 389 KGILDHAGTVSAISEVIEPLKRNLTELFKAQDYQAQPLDHLT 430
>SB_39930| Best HMM Match : Keratin_B2 (HMM E-Value=0.25)
Length = 312
Score = 33.9 bits (74), Expect = 0.18
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 275 SVQNEALNTMFRIIPAGVNVCCRTYASHEIPDKLKDIPTSA 397
+V +A+NT ++ +N CCRT + I K +PT A
Sbjct: 251 TVPTKAINTCKTVLTKAINTCCRTVPTKAINTCCKTVPTKA 291
>SB_47331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -1
Query: 445 TGSVEKIFYHVEELRIRTCRNIFELIWNLMTSVCAAADIHSSWYDSEHCIEGF 287
TG+V +YH +L I + NI W VC D ++Y S++ I+ F
Sbjct: 203 TGAVYTDYYHDSDLTIGSVLNI----WGRKFQVCDCDDFTKAYYKSKYGIDSF 251
>SB_24841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 579
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +1
Query: 376 QRYSYKCESEVLPHGRIFFPPSLSSC 453
QR YK SE HGR FP SL C
Sbjct: 163 QRVGYKVSSEAHIHGRQSFPLSLDHC 188
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,957,412
Number of Sequences: 59808
Number of extensions: 452358
Number of successful extensions: 831
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2645618622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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