Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_I16
         (916 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73899-2|CAA98074.1|  536|Caenorhabditis elegans Hypothetical pr...   155   5e-38
U28738-2|AAA68309.4|  982|Caenorhabditis elegans Hypothetical pr...    33   0.38 
Z78016-5|CAB01442.2|  479|Caenorhabditis elegans Hypothetical pr...    30   2.7  
AF000299-10|AAC47986.1|  338|Caenorhabditis elegans Seven tm rec...    29   3.5  

>Z73899-2|CAA98074.1|  536|Caenorhabditis elegans Hypothetical
           protein ZK829.4 protein.
          Length = 536

 Score =  155 bits (375), Expect = 5e-38
 Identities = 72/140 (51%), Positives = 101/140 (72%), Gaps = 1/140 (0%)
 Frame = +2

Query: 350 ASHEIPDKLKDIPTSANPKFFHMVEYFFHRACQVVEDKLVEDLKSRTPIEEKKKK-VAGI 526
           A  ++ D+ K +    NP F+ MV+++F++  +V+  KL E+LKS +  ++ KK  V+GI
Sbjct: 24  AHSQVLDEQKPMEEQVNPSFYKMVDFYFNKGAEVIAPKLAEELKSNSLSQKDKKNLVSGI 83

Query: 527 LKLMEPCDHILEIQFPLRRDSGDYEMILGYRAQXSTHRTPXKGGIRFSXDVTRDEVKALS 706
           L  ++P + +L I FP+RRD+G++E+I  +RAQ S HRTP KGGIR+S DV  DEVKALS
Sbjct: 84  LGAIKPVNKVLYITFPIRRDNGEFEVIEAWRAQHSEHRTPTKGGIRYSLDVCEDEVKALS 143

Query: 707 XLMTFKCACVDVPFGGAKXG 766
            LMT+KCA VDVPFGGAK G
Sbjct: 144 ALMTYKCAVVDVPFGGAKGG 163


>U28738-2|AAA68309.4|  982|Caenorhabditis elegans Hypothetical
           protein T28D9.7 protein.
          Length = 982

 Score = 32.7 bits (71), Expect = 0.38
 Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
 Frame = +2

Query: 269 KNSVQNEAL--NTMFRIIPAGVNVCCRTYASHEIPDKLKDIPTSANPKFFHMVEYFFHRA 442
           ++ V+ E L  N  F  +  G    C    S  I  + K     AN  FF + E  F+R 
Sbjct: 443 EDDVEQEELDENVSFSTVSGGETFSCED-KSRPITSEEK----KANQMFFLLDETAFNR- 496

Query: 443 CQVVEDKLVEDLKSR--TPIEEKKKKVAGILKLMEPCDHILEIQFPLRRDSGDY 598
                   V DLKSR    +++  +++A IL++ME   H+      +R  +GD+
Sbjct: 497 -NATRYMSVGDLKSRYGDKVDDVAEEIAVILRIMEKLWHVFMPDSYIRTMTGDF 549


>Z78016-5|CAB01442.2|  479|Caenorhabditis elegans Hypothetical
           protein R186.5 protein.
          Length = 479

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 224 WWLIMLSTTIGLGIGSPYTY 165
           WW I+  TTIG G  +P+TY
Sbjct: 368 WWAIVTMTTIGYGDITPHTY 387


>AF000299-10|AAC47986.1|  338|Caenorhabditis elegans Seven tm
           receptor protein 162 protein.
          Length = 338

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 637 VCGXLCAIA*YHFVIARIAPQRKLNLKNVIAWF 539
           +CG L  +   HF+    A QRK NLK    W+
Sbjct: 95  ICGVLMPMFVVHFIFRYFAMQRKGNLKYFEGWY 127


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,760,662
Number of Sequences: 27780
Number of extensions: 346737
Number of successful extensions: 808
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)