Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_I07
         (878 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   4.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   5.5  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   5.5  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   7.3  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   9.7  

>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 330 EKNPYTTFGINKFADYTP 383
           ++NPY + G+   A Y+P
Sbjct: 18  DQNPYPSIGVESSAFYSP 35


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
 Frame = -1

Query: 482 IYFVWNSIPIXLKSQNLCLLSRQPQSQPALLFLRSIISKF-VNAKRSIWILLVQLV---Y 315
           I F++  IP+ +     C++++   S  A L L   I    + A++ + ++L  +V   +
Sbjct: 241 IIFLFFIIPLIILLILYCIIAKNLMSNAATLVLNKHIDNISLRARKQVVLMLGTVVLSFF 300

Query: 314 LCQV 303
           LC +
Sbjct: 301 LCLI 304


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +2

Query: 476 NKCIVTACKMFKIYRI*LINYLNHLFLEF 562
           +K  +TAC++FKI    +++ L  + + F
Sbjct: 197 DKLEITACRLFKIDNSLILDLLVFITINF 225


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 467 NSIPIXLKSQNLCLLSRQPQSQPALLFLRSIISKF 363
           +S P    SQ+L    + PQ+QPA  +   I+  F
Sbjct: 65  SSSPSSDTSQDLQHSYQSPQTQPARFYSTPIVPHF 99


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 473 RNKCIVTACKMFKI 514
           +NK  +TAC++F I
Sbjct: 252 QNKLEITACRLFSI 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,624
Number of Sequences: 336
Number of extensions: 1983
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)