Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_I07
(878 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.057
SB_49462| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.100
SB_49174| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.100
SB_35600| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.100
SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08) 33 0.30
SB_26881| Best HMM Match : Atrophin-1 (HMM E-Value=0.86) 31 0.93
SB_49063| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_33866| Best HMM Match : NOGCT (HMM E-Value=6.8) 31 1.6
SB_59547| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
>SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 35.5 bits (78), Expect = 0.057
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +3
Query: 219 LFEIFVKXHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQS 398
+F+ +VK H + YKD+ + + FK +L I+ N ++ +N D + +E +
Sbjct: 555 VFDKYVKKHKKNYKDNKEHHTRREHFKHNLRFIHSKNRRHAGYYLAMNHLGDRSDKELRV 614
Query: 399 RLGLR 413
G R
Sbjct: 615 LRGRR 619
>SB_49462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 659
Score = 34.7 bits (76), Expect = 0.100
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +3
Query: 222 FEIFVKXHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQSR 401
F+ F + H++ Y+DD++ F+ ++ I +N ++ N FAD T +E +S
Sbjct: 486 FDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNRRSLPYKLEPNHFADLTDDEFKSY 545
Query: 402 LG 407
G
Sbjct: 546 KG 547
>SB_49174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 209
Score = 34.7 bits (76), Expect = 0.100
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +3
Query: 222 FEIFVKXHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQSR 401
F+ F + H++ Y+DD++ F+ ++ I +N ++ N FAD T +E +S
Sbjct: 44 FDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNRRSLPYKLEPNHFADLTDDEFKSY 103
Query: 402 LG 407
G
Sbjct: 104 KG 105
>SB_35600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 305
Score = 34.7 bits (76), Expect = 0.100
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +3
Query: 222 FEIFVKXHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQSR 401
F+ F + H++ Y+DD++ F+ ++ I +N ++ N FAD T +E +S
Sbjct: 143 FDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNRRSLPYKLEPNHFADLTDDEFKSY 202
Query: 402 LG 407
G
Sbjct: 203 KG 204
>SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 33.9 bits (74), Expect = 0.17
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +3
Query: 222 FEIFVKXHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQS 398
F+ F + H++ Y+DD++ F+ ++ I +N ++ N FAD T +E +S
Sbjct: 1194 FDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNRRSLPYKLEPNHFADLTDDEFKS 1252
>SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08)
Length = 1555
Score = 33.1 bits (72), Expect = 0.30
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +3
Query: 222 FEIFVKXHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQSR 401
F+ F + H++ Y+DD++ F+ ++ I +N ++ N FAD T +E +S
Sbjct: 1286 FDEFRQQHDKMYEDDSEHCRRKHIFRHNVRYIRSMNRRSLPHKLEPNHFADLTDDEFKSY 1345
Query: 402 LG 407
G
Sbjct: 1346 KG 1347
>SB_26881| Best HMM Match : Atrophin-1 (HMM E-Value=0.86)
Length = 1110
Score = 31.5 bits (68), Expect = 0.93
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 249 REYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINK--FADYTPEEQQSRLGLRLPA 422
R Y DD + + + KK +A I++ + + T I+ + D TPEE+ R + +
Sbjct: 905 RHYPDDEEFKTISEKMKKEVA-ISETSRRPSDATHFIHSLDYIDETPEEKLERRRIEIMT 963
Query: 423 KKT*VLRLQXYRNAI 467
+ +L YRN +
Sbjct: 964 RDIRILSTSPYRNIV 978
>SB_49063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +3
Query: 222 FEIFVKXHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQSR 401
F+ F + H++ +DD++ F+ ++ I +N ++ N FAD T +E +S
Sbjct: 64 FDEFRQQHDKVCEDDSEHRRRKHIFRHNVRYIRSMNRRSLPYKLEPNHFADLTDDEFKSY 123
Query: 402 LG 407
G
Sbjct: 124 KG 125
>SB_33866| Best HMM Match : NOGCT (HMM E-Value=6.8)
Length = 234
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +3
Query: 222 FEIFVKXHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQSR 401
F+ F + H++ Y+DD++ F+ ++ I + ++ N F D T +E +S
Sbjct: 44 FDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMKRRSLPYKLEPNHFGDLTDDEFKSY 103
Query: 402 LG 407
G
Sbjct: 104 KG 105
>SB_59547| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1516
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +3
Query: 186 PSHYALNQAKXLFEIFVKXHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGIN 362
P YA N +++I V N EY AD + Q L IN + P TTF ++
Sbjct: 249 PFPYAYNTPS-IYKISVYASNEEYNASADAVITVQDTITGLHLINPIPPMIPGTTFNVS 306
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,377,476
Number of Sequences: 59808
Number of extensions: 245346
Number of successful extensions: 523
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 522
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2502612210
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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