Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_I07
         (878 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003231-1|AAO24986.1|  614|Drosophila melanogaster LP08529p pro...    41   0.002
AE014297-200|AAF52055.2|  614|Drosophila melanogaster CG12163-PA...    41   0.002
AE014297-199|AAN13266.1|  475|Drosophila melanogaster CG12163-PB...    41   0.002
AE013599-2873|AAF57567.1|   79|Drosophila melanogaster CG10460-P...    39   0.010

>BT003231-1|AAO24986.1|  614|Drosophila melanogaster LP08529p
           protein.
          Length = 614

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
 Frame = +3

Query: 195 YALNQAKXLFEIFVKXHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTT-FGINKFA 371
           +  ++   LF  F     R Y   A+R++  + F+++L  I +LN     +  +GI +FA
Sbjct: 299 HRFDKVDHLFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFA 358

Query: 372 DYTPEEQQSRLGL 410
           D T  E + R GL
Sbjct: 359 DMTSSEYKERTGL 371


>AE014297-200|AAF52055.2|  614|Drosophila melanogaster CG12163-PA,
           isoform A protein.
          Length = 614

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
 Frame = +3

Query: 195 YALNQAKXLFEIFVKXHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTT-FGINKFA 371
           +  ++   LF  F     R Y   A+R++  + F+++L  I +LN     +  +GI +FA
Sbjct: 299 HRFDKVDHLFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFA 358

Query: 372 DYTPEEQQSRLGL 410
           D T  E + R GL
Sbjct: 359 DMTSSEYKERTGL 371


>AE014297-199|AAN13266.1|  475|Drosophila melanogaster CG12163-PB,
           isoform B protein.
          Length = 475

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
 Frame = +3

Query: 195 YALNQAKXLFEIFVKXHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTT-FGINKFA 371
           +  ++   LF  F     R Y   A+R++  + F+++L  I +LN     +  +GI +FA
Sbjct: 160 HRFDKVDHLFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFA 219

Query: 372 DYTPEEQQSRLGL 410
           D T  E + R GL
Sbjct: 220 DMTSSEYKERTGL 232


>AE013599-2873|AAF57567.1|   79|Drosophila melanogaster CG10460-PA
           protein.
          Length = 79

 Score = 38.7 bits (86), Expect = 0.010
 Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
 Frame = +3

Query: 246 NREYKDDADRELHYQSFKKHLAEINQLNEKNPYT-TFGINKFADYTPEEQQSRLGLRLP 419
           N E ++D  R   Y   K  + E N+  EK   T   GIN  AD TPEE   R G ++P
Sbjct: 19  NYEAEEDLMRRRIYAESKARIEEHNRKFEKGEVTWKMGINHLADLTPEEFAQRCGKKVP 77


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,806,602
Number of Sequences: 53049
Number of extensions: 375253
Number of successful extensions: 756
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)