Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_I07
         (878 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021497-4|CAA16407.1|  386|Caenorhabditis elegans Hypothetical ...    54   2e-07
Z70750-3|CAA94738.1|  374|Caenorhabditis elegans Hypothetical pr...    40   0.002
AL021497-1|CAA16404.1|  382|Caenorhabditis elegans Hypothetical ...    39   0.004
U64859-10|AAC69091.2|  383|Caenorhabditis elegans Hypothetical p...    38   0.007
AL110477-10|CAB54334.1|  328|Caenorhabditis elegans Hypothetical...    35   0.067
AC006627-4|AAK85459.1|  712|Caenorhabditis elegans Hypothetical ...    29   4.4  

>AL021497-4|CAA16407.1|  386|Caenorhabditis elegans Hypothetical
           protein Y51A2D.8 protein.
          Length = 386

 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
 Frame = +3

Query: 222 FEIFVKXHNREYKDDADRELHYQSFKKHLAEINQLNEKNPY----TTFGINKFADYTPEE 389
           FE F K +NR+YKD+++ +  + +F K    +++LN K+      T FGINKF+D +  E
Sbjct: 43  FEDFKKKYNRKYKDESENQQRFNNFVKSYNNVDKLNAKSKAAGYDTQFGINKFSDLSTAE 102

Query: 390 QQSRLGLRLPAKKT 431
              RL   +P+  T
Sbjct: 103 FHGRLSNVVPSNNT 116


>Z70750-3|CAA94738.1|  374|Caenorhabditis elegans Hypothetical
           protein C50F4.3 protein.
          Length = 374

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
 Frame = +3

Query: 222 FEIFVKXHNREYKDDADRELHYQSF---KKHLAEINQLNEKNPY-TTFGINKFADYTPEE 389
           FE F+  + R YKD+ +++  +Q F      + ++N+  +K  + T +GINKF+D + +E
Sbjct: 47  FEDFIVKYKRNYKDEIEKKFRFQQFVATHNRVGKMNKAAKKAGHDTKYGINKFSDLSKKE 106


>AL021497-1|CAA16404.1|  382|Caenorhabditis elegans Hypothetical
           protein Y51A2D.1 protein.
          Length = 382

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
 Frame = +3

Query: 222 FEIFVKXHNREYKDDADRELHYQSFKKHLAEINQLNEK----NPYTTFGINKFADYTPEE 389
           F  F K  +R YK +A+ +L  Q+F K    + +LN+        + F +N+F+D T  E
Sbjct: 44  FVEFKKKFSRTYKSEAENQLRLQNFVKSRNNVVRLNKNAQKAGRNSNFAVNQFSDLTTSE 103

Query: 390 QQSRLGLRLPAKKT 431
              RL  R P   T
Sbjct: 104 LHQRLS-RFPPNLT 116


>U64859-10|AAC69091.2|  383|Caenorhabditis elegans Hypothetical
           protein R09F10.1 protein.
          Length = 383

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 18/59 (30%), Positives = 30/59 (50%)
 Frame = +3

Query: 219 LFEIFVKXHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQ 395
           +F  F+   +R+Y    + E  YQ F +++ E     E+N      +N+F D+T EE Q
Sbjct: 81  MFNDFILKFDRKYTSVEEFEYRYQIFLRNVIEFEAEEERNLGLDLDVNEFTDWTDEELQ 139


>AL110477-10|CAB54334.1|  328|Caenorhabditis elegans Hypothetical
           protein Y113G7B.15 protein.
          Length = 328

 Score = 35.1 bits (77), Expect = 0.067
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
 Frame = +3

Query: 243 HNREYKDDADRELHYQSFKKHLAEINQLNEK----NPYTTFGINKFADYTPEEQQSR 401
           H + Y+  A+++     F K+  +I +LN K        TFG NKFAD   +E  +R
Sbjct: 3   HKKHYRTPAEKDRRLAHFAKNHQKIQELNAKARREGRNVTFGWNKFADKNRQELSAR 59


>AC006627-4|AAK85459.1|  712|Caenorhabditis elegans Hypothetical
           protein E01A2.2a protein.
          Length = 712

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 9/71 (12%)
 Frame = +3

Query: 189 SHYALNQAKXLFEIFVKXHNRE------YK-DDAD--RELHYQSFKKHLAEINQLNEKNP 341
           + Y     K   E F + H  E      YK DDA   RE H ++ +K L   N+L E+  
Sbjct: 108 NEYKTEHRKHQLERFFRAHKDEEWFRLKYKPDDAKKLREAHLENVQKRLQVFNELKEQGQ 167

Query: 342 YTTFGINKFAD 374
           +  F ++ F D
Sbjct: 168 FNKFSLD-FGD 177


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,670,961
Number of Sequences: 27780
Number of extensions: 195260
Number of successful extensions: 437
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 435
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)