Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_I06
         (1191 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0486 - 3455030-3455770                                           29   9.5  

>06_01_0486 - 3455030-3455770
          Length = 246

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
 Frame = -2

Query: 344 SXPLFSPPXXSPXFPLXLPXXLPSPFXXFXFXXXXFS-PXLLXSPLPXSPXXYFLP 180
           S P + PP   P  P  +P  +P P   +       S P  +  P P SP  Y  P
Sbjct: 95  SPPPYVPPYIPPPTPPYVPPYIPPPTPPYVPPPTPPSPPPYVPPPTPPSPPPYVPP 150


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.308    0.138    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,271,982
Number of Sequences: 37544
Number of extensions: 85463
Number of successful extensions: 86
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 84
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3631571424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)