Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_I05
         (897 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ...   100   4e-20
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ...    64   6e-09
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi...    60   1e-07
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ...    52   3e-05
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h...    50   6e-05
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma...    47   6e-04
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ...    39   0.15 

>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
           root|Rep: Putative uncharacterized protein - Salmonella
           typhimurium
          Length = 127

 Score =  100 bits (240), Expect = 4e-20
 Identities = 46/60 (76%), Positives = 47/60 (78%)
 Frame = +1

Query: 631 PXTSITKIDAQXRGGXTRQXYKXSRRXPLXAPSCXLLFRPRRLPDTCPPFPLRXXWXFLI 810
           P TSITKIDAQ RGG TRQ YK +RR PL APSC LLFRP RLPDTCPPF LR  W FLI
Sbjct: 22  PLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLI 81


>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli
          Length = 147

 Score = 63.7 bits (148), Expect = 6e-09
 Identities = 46/106 (43%), Positives = 49/106 (46%)
 Frame = +1

Query: 445 SLTXCXRSFGCGXRYQLTQRR*YGYPXNQGDXAGKXM*XKGXQXXXXXXXXXXXXFFHRP 624
           SLT   RSFGCG RY+LT           GD  G  +     +             F   
Sbjct: 41  SLTRYARSFGCGERYRLTD----------GD--GNFL-EDTRKTLSKEEIRPRRSRFSIG 87

Query: 625 PPPXTSITKIDAQXRGGXTRQXYKXSRRXPLXAPSCXLLFRPRRLP 762
             P TSI K DAQ  GG TRQ YK  RR PL APSC LLF P  LP
Sbjct: 88  SAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133


>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
           organisms|Rep: Predicted protein - Nematostella
           vectensis
          Length = 97

 Score = 59.7 bits (138), Expect = 1e-07
 Identities = 28/40 (70%), Positives = 29/40 (72%)
 Frame = +1

Query: 631 PXTSITKIDAQXRGGXTRQXYKXSRRXPLXAPSCXLLFRP 750
           P TSITK DAQ  GG TRQ YK +RR PL APSC LLF P
Sbjct: 58  PLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97


>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
           root|Rep: Putative uncharacterized protein - Escherichia
           coli
          Length = 61

 Score = 51.6 bits (118), Expect = 3e-05
 Identities = 31/61 (50%), Positives = 33/61 (54%)
 Frame = -1

Query: 630 GRRPMEKRQQRGLFTGSGLLXAFXSHXLSCXIPLIXWITVLPPLSELIPLAAAERPXAXS 451
           G  PMEKR +  L      +  F         PLI WITVLPPLSEL PLAA ERP   S
Sbjct: 5   GAEPMEKRLRCWLLP----VLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERPSVAS 60

Query: 450 Q 448
           Q
Sbjct: 61  Q 61


>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
           Alpha-hemolysin - Aeromonas hydrophila
          Length = 59

 Score = 50.4 bits (115), Expect = 6e-05
 Identities = 26/29 (89%), Positives = 26/29 (89%)
 Frame = +3

Query: 447 TDSLXSVVRLRXAVSAHSKAVIRLSTXSG 533
           TDSL SVVRLR AVSAHSKAVIRLST SG
Sbjct: 24  TDSLRSVVRLRRAVSAHSKAVIRLSTESG 52


>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
           Magnoliophyta|Rep: Putative reverse transcriptase -
           Zingiber officinale (Ginger)
          Length = 49

 Score = 47.2 bits (107), Expect = 6e-04
 Identities = 20/23 (86%), Positives = 21/23 (91%)
 Frame = +1

Query: 373 SALMNRPXPGERRFAYWALFRFL 441
           +ALMNRP  GERRFAYWALFRFL
Sbjct: 25  AALMNRPTRGERRFAYWALFRFL 47


>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
           Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
           Beggiatoa sp. SS
          Length = 114

 Score = 39.1 bits (87), Expect = 0.15
 Identities = 19/41 (46%), Positives = 24/41 (58%)
 Frame = +1

Query: 628 PPXTSITKIDAQXRGGXTRQXYKXSRRXPLXAPSCXLLFRP 750
           PP T+ITKI  Q +   T+  YK +   PL +PS  LLF P
Sbjct: 74  PPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 550,447,504
Number of Sequences: 1657284
Number of extensions: 7471792
Number of successful extensions: 11828
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11821
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81161904978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)