Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_I04
         (866 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    25   1.0  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    25   1.0  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   7.2  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   7.2  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    21   9.5  

>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +1

Query: 376 KTEKLVLAAEVQSLKLASPKTIFKYNRKAKEPIVRSDALEVDY 504
           KT  LVL   V S+  A+ K   KY+      I++SD L  +Y
Sbjct: 2   KTLVLVLFVAVLSVVFAADKYTTKYDNIDLNQILKSDRLLKNY 44


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +1

Query: 376 KTEKLVLAAEVQSLKLASPKTIFKYNRKAKEPIVRSDALEVDY 504
           KT  LVL   V S+  A+ K   KY+      I++SD L  +Y
Sbjct: 2   KTLVLVLFVAVVSVVFAADKYTTKYDNIDLNQILKSDRLLKNY 44


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 489 CVTSYNWLFGFPIVFENCF 433
           CV  +N +FG+ I+F + F
Sbjct: 147 CVIYFNRIFGWNILFGHIF 165


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +3

Query: 375 QNRKTSISSRSAV-LKIGFAENNFQIQ*ESQRANCKK 482
           + R   I  R  V LKI   E+  Q+  +++RA C++
Sbjct: 90  KTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQ 126


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = -2

Query: 130 FXPEATAEAIKPKTERHRHCSNHILKK*NQILRIPYS 20
           F  E   + +      H++     L + N IL++PYS
Sbjct: 89  FLKEKAVDFLTILNSMHKYQPRFHLVRANDILKLPYS 125


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,016
Number of Sequences: 336
Number of extensions: 3681
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23893023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)