Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_I03
         (854 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.1  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   3.1  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   4.1  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   7.1  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -3

Query: 309  FQCSSTCSXPVKVRVSKSNIKRDKEYLLHTQHCV 208
            F CS+ C  P K+R+   N+  +  YL     CV
Sbjct: 1109 FGCSNRCFFPSKIRIC-WNVLLNCVYLFLCGFCV 1141


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = -1

Query: 527 LTLQAFSRCILCTARLEIEVHIMYIKRPGFYCRFSKYVFYL 405
           +T   F  C+L  +   + +H++YI   G  C  +  VFY+
Sbjct: 255 ITQVIFVICVLVQSEKIVWLHLVYISFLGIIC--AADVFYI 293


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 678 YHHDGGNYGLKRKFP 634
           +HHD   YGL+   P
Sbjct: 191 FHHDAAGYGLRNYGP 205


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 720 MYCIPFHRRXTFKYRTSVRHVL 785
           M   PF+R+   +++ S+RH L
Sbjct: 171 MDLFPFYRQNQQRWQNSIRHSL 192


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,091
Number of Sequences: 336
Number of extensions: 2959
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23659332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)