Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_I02
         (861 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49937-6|CAA90185.2|  453|Caenorhabditis elegans Hypothetical pr...    32   0.46 
Z81542-10|CAB04419.4|  411|Caenorhabditis elegans Hypothetical p...    30   1.8  
AF077534-3|AAC26290.1|  389|Caenorhabditis elegans Hypothetical ...    30   2.4  
Z77657-6|CAB01150.2|  607|Caenorhabditis elegans Hypothetical pr...    29   4.3  
AC006696-3|AAF39984.1|  391|Caenorhabditis elegans Hypothetical ...    28   7.4  

>Z49937-6|CAA90185.2|  453|Caenorhabditis elegans Hypothetical
           protein F14F3.3 protein.
          Length = 453

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = +2

Query: 224 ILQPTMFEXIKELAKEYNIEXSCDKYMNVDVVK-QFMEMYKMGMLPRGETFVHTNELQME 400
           I+ PT      +L    NIE S D  +N+D+ K +F + ++ GM     +      L + 
Sbjct: 272 IMGPTDLNAFDKLKTRENIEMSSDAIVNLDIPKVEFSDGFRDGMKAWNRSVQTWLALYVH 331

Query: 401 EAVKVFRV 424
             VKV RV
Sbjct: 332 SRVKVMRV 339


>Z81542-10|CAB04419.4|  411|Caenorhabditis elegans Hypothetical
           protein F49A5.7 protein.
          Length = 411

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = +3

Query: 486 STEACSSTLLLPRASTEPTARVS-TCPLLTRSIPTSSLTAMSSVKPL 623
           + EA SST LL   ST  TA +S T   ++RSI   + TA ++++PL
Sbjct: 91  TNEASSSTKLL---STSSTAEISSTTRTVSRSIKPETSTASTTIRPL 134


>AF077534-3|AAC26290.1|  389|Caenorhabditis elegans Hypothetical
           protein K07D4.6 protein.
          Length = 389

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
 Frame = +3

Query: 483 GSTEACSS---TLLLPRASTEPTARVSTCPLLTRSIPTSSLTAMSSVKPL**R*LKPPRT 653
           G+TE  S+   T      +TEPT   ST    T ++PTS+ T  ++          P  T
Sbjct: 257 GTTEETSTEPETTTTSTTTTEPTTTTSTTTQTTTTVPTSTSTISTTSTTT----TTPTTT 312

Query: 654 RSSGNTTASRLLTTIWVXI 710
            ++ +TT S  L  +WV I
Sbjct: 313 TTTTSTTTSDDL--LWVKI 329


>Z77657-6|CAB01150.2|  607|Caenorhabditis elegans Hypothetical
           protein F08H9.1 protein.
          Length = 607

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -3

Query: 466 RSPHENIEVLSVVEDSEDFD 407
           R+P+ENI++L   +DSED D
Sbjct: 581 RAPYENIDLLLSTDDSEDID 600


>AC006696-3|AAF39984.1|  391|Caenorhabditis elegans Hypothetical
           protein W08E12.7 protein.
          Length = 391

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = -3

Query: 316 DIDIHV--LVATXLDVILLGELLDXLKHGRLEDMVKQLHDAKRLQL 185
           D+  H+  L+AT    +++G   D    G+L D+++  HDA  + +
Sbjct: 120 DLGTHIDGLIATAAHTVVVGASKDNKVTGKLADLLRGTHDALEIAI 165


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,722,049
Number of Sequences: 27780
Number of extensions: 291448
Number of successful extensions: 675
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)