Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_H24
(936 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 33 0.33
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.43
03_01_0515 - 3864796-3865425 32 0.57
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 31 1.3
07_01_0080 + 587674-588510 30 3.0
12_02_0299 - 17051570-17052474,17053542-17053755 29 4.0
01_01_0929 - 7344911-7345978 29 4.0
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 29 5.3
07_01_0516 - 3850252-3852870 29 5.3
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 7.0
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646... 29 7.0
06_01_0486 - 3455030-3455770 28 9.3
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 33.1 bits (72), Expect = 0.33
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
PP P F F P PP PP + PPPP
Sbjct: 62 PPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPP 98
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 32.7 bits (71), Expect = 0.43
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 338 KXPPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
K PP P P PP PP P K PPPP
Sbjct: 342 KGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPP 380
>03_01_0515 - 3864796-3865425
Length = 209
Score = 32.3 bits (70), Expect = 0.57
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
PP P P P PP PP P+ PPPP
Sbjct: 83 PPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPPP 119
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
PP P P P PP PP P K PP P
Sbjct: 353 PPPPPPPPPPPPPPPPPPPRPPPPPPPIKKGAPPPAP 389
>07_01_0080 + 587674-588510
Length = 278
Score = 29.9 bits (64), Expect = 3.0
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -2
Query: 314 PXFPFXPXXXXXXXPPXPPXPTXKXXXPPPPXF 216
P P P PP PP P PPPP F
Sbjct: 91 PPPPPPPPPSSGSPPPPPPPPPPPPPPPPPPLF 123
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -2
Query: 305 PFXPXXXXXXXPPXPPXPTXKXXXPPPPXFF 213
P P PP PP P PPPP F
Sbjct: 93 PPPPPPPSSGSPPPPPPPPPPPPPPPPPPLF 123
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 29.5 bits (63), Expect = 4.0
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = -2
Query: 329 PXXXXPXFPFXPXXXXXXXP-PXPPXPTXKXXXPPPPXFFF 210
P P PF P P PP P PPPP F F
Sbjct: 222 PRPWFPPIPFLTPPPPPFLPFPLPPIPFLTPPSPPPPAFPF 262
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPPXF 216
P P FP P PP PP P PPPP F
Sbjct: 302 PQLPPLPHFPPLPSFYPSPPPPPPPPP------PPPPSF 334
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = -2
Query: 332 PPXXXXPXFP-FXPXXXXXXXPPXPPXPTXKXXXPPPPXFF 213
PP P P F P PP PP P+ PP F
Sbjct: 305 PPLPHFPPLPSFYPSPPPPPPPPPPPPPSFPWPFPPLAPLF 345
>01_01_0929 - 7344911-7345978
Length = 355
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -2
Query: 305 PFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
PF PP PP P K PPPP
Sbjct: 9 PFLLWSPAPPTPPLPPSPPSKTRRPPPP 36
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPPXFFF 210
PP P P P PP P PT PPPP ++
Sbjct: 374 PPNPPPPPPPMSPSCLL---PPIIPAPTFTYSSPPPPPLYY 411
>07_01_0516 - 3850252-3852870
Length = 872
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
PP P P P PP PP P PPPP
Sbjct: 10 PPPRLLPPQP--PPTSRPLPPPPPPPPPAHGPSPPPP 44
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
PP P P P PP PP P PPPP
Sbjct: 1140 PPLPEGP--PPLPSDSPPCQPPLPPSPPPATPPPPPP 1174
>04_03_0660 +
18463011-18463322,18463424-18463516,18464500-18464607,
18464892-18465044,18465256-18465354,18465443-18465571,
18465987-18466166,18466208-18466246,18466247-18466363,
18466445-18466609
Length = 464
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 272 PPXPPXPTXKXXXPPPP 222
PP PP PT PPPP
Sbjct: 53 PPPPPPPTQPAPPPPPP 69
>06_01_0486 - 3455030-3455770
Length = 246
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/39 (35%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXP--PPP 222
PP P P+ P PP P PT P PPP
Sbjct: 101 PPYIPPPTPPYVPPYIPPPTPPYVPPPTPPSPPPYVPPP 139
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/39 (35%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXP--PPP 222
PP P P+ P PP P PT P PPP
Sbjct: 113 PPYIPPPTPPYVPPPTPPSPPPYVPPPTPPSPPPYVPPP 151
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,500,221
Number of Sequences: 37544
Number of extensions: 132300
Number of successful extensions: 1833
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1450
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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