Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_H24
(936 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 33 0.44
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 32 0.58
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 30 3.1
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 30 3.1
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 28 9.4
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 28 9.4
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 32.7 bits (71), Expect = 0.44
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
PP P P P PP PP P PPPP
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPP 405
Score = 32.7 bits (71), Expect = 0.44
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
PP P P P PP PP P PPPP
Sbjct: 378 PPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPP 414
Score = 32.7 bits (71), Expect = 0.44
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
PP P P P PP PP P PPPP
Sbjct: 380 PPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPP 416
Score = 32.3 bits (70), Expect = 0.58
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -2
Query: 344 N*KXPPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
N PP P P P PP PP P PPPP
Sbjct: 362 NMSPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPP 402
Score = 32.3 bits (70), Expect = 0.58
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
PP P P P PP PP P PPPP
Sbjct: 392 PPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Score = 31.9 bits (69), Expect = 0.77
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
PP P P P PP PP P PPPP
Sbjct: 372 PPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPP 408
Score = 31.9 bits (69), Expect = 0.77
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
PP P P P PP PP P PPPP
Sbjct: 375 PPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPP 411
Score = 31.9 bits (69), Expect = 0.77
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
PP P P P PP PP P PPPP
Sbjct: 381 PPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPP 417
Score = 31.9 bits (69), Expect = 0.77
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
PP P P P PP PP P PPPP
Sbjct: 389 PPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPP 425
Score = 31.9 bits (69), Expect = 0.77
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
PP P P P PP PP P PPPP
Sbjct: 390 PPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPP 426
Score = 31.9 bits (69), Expect = 0.77
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
PP P P P PP PP P PPPP
Sbjct: 391 PPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 528 PPXPXPPXXKKXPXFPPPXXSXLXPXXXXXPP 433
PP P PP P PPP S P PP
Sbjct: 368 PPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPP 399
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = -1
Query: 543 PXXXXPPXPXPPXXKKXPXFPPPXXSXLXPXXXXXPP 433
P PP P PP + P PPP P PP
Sbjct: 379 PPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPP 415
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -1
Query: 543 PXXXXPPXPXPPXXKKXPXFPPPXXSXLXPXXXXXPP 433
P PP P PP P PPP P PP
Sbjct: 392 PPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = -1
Query: 588 PPXXXXXXXXXXXXXPXXXXPPXPXPPXXKKXPXFPPPXXSXLXPXXXXXPP 433
PP P PP P PP P PPP P PP
Sbjct: 366 PPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPP 417
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
PP P P P P PP P PPPP
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPP 403
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = -1
Query: 588 PPXXXXXXXXXXXXXPXXXXPPXPXPPXXKKXPXFPPPXXSXLXPXXXXXPP 433
PP P PP P PP P PPP P PP
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPP 421
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = -1
Query: 588 PPXXXXXXXXXXXXXPXXXXPPXPXPPXXKKXPXFPPPXXSXLXPXXXXXPP 433
PP P PP P PP P PPP P PP
Sbjct: 372 PPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPP 423
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = -1
Query: 588 PPXXXXXXXXXXXXXPXXXXPPXPXPPXXKKXPXFPPPXXSXLXPXXXXXPP 433
PP P PP P PP P PPP P PP
Sbjct: 378 PPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = -1
Query: 588 PPXXXXXXXXXXXXXPXXXXPPXPXPPXXKKXPXFPPPXXSXLXPXXXXXPP 433
PP P PP P PP P PPP P PP
Sbjct: 380 PPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPP 431
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = -1
Query: 588 PPXXXXXXXXXXXXXPXXXXPPXPXPPXXKKXPXFPPPXXSXLXPXXXXXPP 433
PP P PP P PP P PPP P PP
Sbjct: 381 PPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPP 432
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPP 225
PP P P P PP PP P PPP
Sbjct: 383 PPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPP 418
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
PP P P P PP PP P PP P
Sbjct: 384 PPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAP 420
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
PP P P P PP PP P PPP
Sbjct: 386 PPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPP 422
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -2
Query: 329 PXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
P P P P PP PP P PPPP
Sbjct: 395 PPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPP 430
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPP 225
PP P P P PP PP P PPP
Sbjct: 397 PPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPP 432
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
PP P P P PP P P PPPP
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPP 406
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
PP P P P P PP P PPPP
Sbjct: 373 PPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPP 409
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
PP P P P P PP P PPPP
Sbjct: 374 PPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPP 410
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
PP P P P PP P P PPPP
Sbjct: 395 PPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPP 431
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
PP P P P PP P P PPPP
Sbjct: 396 PPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPP 432
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 32.3 bits (70), Expect = 0.58
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 305 PFXPXXXXXXXPPXPPXPTXKXXXPPPPXF 216
P P PP PP PT + PPPP F
Sbjct: 301 PPPPPPTDFAPPPPPPEPTSELPPPPPPPF 330
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 31.5 bits (68), Expect = 1.0
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
PP P P PP PP PT PPPP
Sbjct: 354 PPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPP 390
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
PP P P PP PP PT PPPP
Sbjct: 374 PPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPPPP 410
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
PP P P+ P PP P P PPPP
Sbjct: 84 PPTNFSPNPPYPPPPYPPYPPPPPYPPPPNPPYPPPP 120
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/38 (31%), Positives = 14/38 (36%)
Frame = -2
Query: 329 PXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPPXF 216
P P +P P PP PP P PP P +
Sbjct: 95 PPPPYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPY 132
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -1
Query: 543 PXXXXPPXPXPPXXKKXPXFPPPXXSXLXPXXXXXPP 433
P PP P PP P PPP P PP
Sbjct: 90 PNPPYPPPPYPPYPPPPPYPPPPNPPYPPPPNAPYPP 126
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 528 PPXPXPPXXKKXPXFPPPXXSXLXPXXXXXPP 433
PP P PP P PPP S P PP
Sbjct: 684 PPPPPPPPPPPPPPPPPPQPSTPPPPPPSTPP 715
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 29.9 bits (64), Expect = 3.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 543 PXXXXPPXPXPPXXKKXPXFPPP 475
P PP P PP P FPPP
Sbjct: 469 PPPPPPPPPPPPPPPPPPPFPPP 491
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2
Query: 272 PPXPPXPTXKXXXPPPPXF 216
PP PP P PPPP F
Sbjct: 470 PPPPPPPPPPPPPPPPPPF 488
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
PP P P PP PP P PPPP
Sbjct: 694 PPPPPPPPPPLLSGTLPMPPPPPPPPPGCAGLPPPPP 730
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 28.3 bits (60), Expect = 9.4
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -2
Query: 332 PPXXXXPXFPFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
P P P P PP PP P PPPP
Sbjct: 656 PEAGPPPPPPPPPGGQAGGAPPPPPPPLPGGAAPPPP 692
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 28.3 bits (60), Expect = 9.4
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -1
Query: 543 PXXXXPPXPXPPXXKKXPXFPPPXXSXLXPXXXXXPP 433
P P P PP P PPP S P PP
Sbjct: 198 PSQITQPPPPPPRPPPSPPPPPPPPSPSPPRPPPPPP 234
Score = 28.3 bits (60), Expect = 9.4
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = -2
Query: 305 PFXPXXXXXXXPPXPPXPTXKXXXPPPP 222
P P PP PP P+ PPPP
Sbjct: 205 PPPPPRPPPSPPPPPPPPSPSPPRPPPP 232
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,709,718
Number of Sequences: 59808
Number of extensions: 76119
Number of successful extensions: 992
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2729039029
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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