Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_H23
         (976 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0610 - 25449085-25453284                                         30   3.2  
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863...    30   3.2  
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    29   5.6  
01_01_0070 - 542603-542686,542803-543441                               29   5.6  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   7.4  
06_01_0486 - 3455030-3455770                                           29   7.4  

>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 18/59 (30%), Positives = 21/59 (35%)
 Frame = +2

Query: 692  ALPXXNXRPXXXPXPXXXPXXPAXXPTX*PFXFPTXFPPXXXXPXXLXPXPXAXLXPPP 868
            +LP    +P   P P   P  P   P   P   P   PP    P    P P   + PPP
Sbjct: 1127 SLPPPTVKPLPPPVPVSSPPPPEKSP---PPPAPVILPP---PPIKSPPPPAPVISPPP 1179


>03_02_0455 -
           8630543-8630893,8630994-8631068,8631149-8631223,
           8631332-8631397,8631891-8631967,8632659-8633070
          Length = 351

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 21/75 (28%), Positives = 23/75 (30%)
 Frame = +2

Query: 695 LPXXNXRPXXXPXPXXXPXXPAXXPTX*PFXFPTXFPPXXXXPXXLXPXPXAXLXPPPXX 874
           LP  +  P   P P   P  P   P   P   P   PP       + P P     PPP  
Sbjct: 257 LPNGSGGPPRPPPPQVPPPPPQAPPPPPP-NAPMGMPPR------IPPPPVGGTQPPPPP 309

Query: 875 XXLXXGXXXGXXXPP 919
             L  G       PP
Sbjct: 310 PPLANGPPRSIPPPP 324


>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 24/82 (29%), Positives = 26/82 (31%)
 Frame = +2

Query: 683  PXXALPXXNXRPXXXPXPXXXPXXPAXXPTX*PFXFPTXFPPXXXXPXXLXPXPXAXLXP 862
            P    P     P   P P   P  P+  P   P   P+  P     P  L P     L P
Sbjct: 1126 PDGPPPLPLDAPPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPS----LPP 1181

Query: 863  PPXXXXLXXGXXXGXXXPPXLP 928
            PP    L  G       PP LP
Sbjct: 1182 PPPPPPLPSGPPP-QPAPPPLP 1202


>01_01_0070 - 542603-542686,542803-543441
          Length = 240

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 21/72 (29%), Positives = 23/72 (31%), Gaps = 1/72 (1%)
 Frame = +2

Query: 656 VXXXPGTXGPXXALPXXNXRPXXXPXPXXXPXX-PAXXPTX*PFXFPTXFPPXXXXPXXL 832
           V   P    P  A P     P     P   P   PA  P   P   P   PP    P  +
Sbjct: 41  VPTAPAKSPPAPATPAPTATPTPPVAPAKAPPVAPAVAPVTPPPPTPKKAPPPPVTPPPV 100

Query: 833 XPXPXAXLXPPP 868
            P P   + PPP
Sbjct: 101 TPPP---VTPPP 109


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 18/63 (28%), Positives = 20/63 (31%), Gaps = 1/63 (1%)
 Frame = +2

Query: 683 PXXALPXXNXRPXXXPXPXXXPXXPAXXP-TX*PFXFPTXFPPXXXXPXXLXPXPXAXLX 859
           P    P    +P   P P   P  P   P +      P   PP    P  L P P     
Sbjct: 548 PPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPP 607

Query: 860 PPP 868
           PPP
Sbjct: 608 PPP 610


>06_01_0486 - 3455030-3455770
          Length = 246

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 18/67 (26%), Positives = 18/67 (26%)
 Frame = +2

Query: 668 PGTXGPXXALPXXNXRPXXXPXPXXXPXXPAXXPTX*PFXFPTXFPPXXXXPXXLXPXPX 847
           P    P    P     P   P P   P  P   P   P   P   PP    P      P 
Sbjct: 68  PSPRCPSCHPPYTPPTPRPPPTPPYVPSPPPYVPPYIPPPTPPYVPPYIPPPTPPYVPPP 127

Query: 848 AXLXPPP 868
               PPP
Sbjct: 128 TPPSPPP 134


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,240,324
Number of Sequences: 37544
Number of extensions: 325460
Number of successful extensions: 819
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2834967080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)