BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_H23
(976 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023940-1|ABB36444.1| 592|Drosophila melanogaster LP20233p pro... 31 3.2
AE014297-2291|AAF55377.2| 594|Drosophila melanogaster CG5225-PA... 31 3.2
AY119485-1|AAM50139.1| 846|Drosophila melanogaster GH07623p pro... 30 5.5
AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA... 30 5.5
AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB... 30 5.5
AE014296-2897|AAF49349.4| 926|Drosophila melanogaster CG13731-P... 29 7.3
BT022850-1|AAY55266.1| 538|Drosophila melanogaster IP13040p pro... 29 9.7
AE013599-1243|AAF58688.1| 610|Drosophila melanogaster CG13214-P... 29 9.7
>BT023940-1|ABB36444.1| 592|Drosophila melanogaster LP20233p
protein.
Length = 592
Score = 30.7 bits (66), Expect = 3.2
Identities = 18/67 (26%), Positives = 21/67 (31%), Gaps = 1/67 (1%)
Frame = +2
Query: 647 HWGVXXXPGTXGPXXALPXXNXRPXXXPXPXXXPXXPAXXPTX*PFXFPT-XFPPXXXXP 823
H G PG GP P P P P P P + +P +PP P
Sbjct: 206 HKGSKGPPGPPGPPGTGPPGPPGPPGTTYPQPPPPPPPPPPPPPSYPYPPYPYPPPGPYP 265
Query: 824 XXLXPXP 844
P P
Sbjct: 266 GPWIPLP 272
>AE014297-2291|AAF55377.2| 594|Drosophila melanogaster CG5225-PA
protein.
Length = 594
Score = 30.7 bits (66), Expect = 3.2
Identities = 18/67 (26%), Positives = 21/67 (31%), Gaps = 1/67 (1%)
Frame = +2
Query: 647 HWGVXXXPGTXGPXXALPXXNXRPXXXPXPXXXPXXPAXXPTX*PFXFPT-XFPPXXXXP 823
H G PG GP P P P P P P + +P +PP P
Sbjct: 208 HKGSKGPPGPPGPPGTGPPGPPGPPGTTYPQPPPPPPPPPPPPPSYPYPPYPYPPPGPYP 267
Query: 824 XXLXPXP 844
P P
Sbjct: 268 GPWIPLP 274
>AY119485-1|AAM50139.1| 846|Drosophila melanogaster GH07623p
protein.
Length = 846
Score = 29.9 bits (64), Expect = 5.5
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = +2
Query: 683 PXXALPXXNXRPXXXPXPXXXPXXPAXXPTX*PFXFPTXFPPXXXXPXXLXPXPXAXLXP 862
P A P P P P P P PT P P PP P P P P
Sbjct: 141 PPPAPPTLVPPPPPAP-PTIKPPPPPAPPTVEPPPPPPPAPPTVEPPPPPPPAPTKVEPP 199
Query: 863 PP 868
PP
Sbjct: 200 PP 201
>AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA,
isoform A protein.
Length = 1109
Score = 29.9 bits (64), Expect = 5.5
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = +2
Query: 683 PXXALPXXNXRPXXXPXPXXXPXXPAXXPTX*PFXFPTXFPPXXXXPXXLXPXPXAXLXP 862
P A P P P P P P PT P P PP P P P P
Sbjct: 404 PPPAPPTLVPPPPPAP-PTIKPPPPPAPPTVEPPPPPPPAPPTVEPPPPPPPAPTKVEPP 462
Query: 863 PP 868
PP
Sbjct: 463 PP 464
>AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB,
isoform B protein.
Length = 1150
Score = 29.9 bits (64), Expect = 5.5
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = +2
Query: 683 PXXALPXXNXRPXXXPXPXXXPXXPAXXPTX*PFXFPTXFPPXXXXPXXLXPXPXAXLXP 862
P A P P P P P P PT P P PP P P P P
Sbjct: 404 PPPAPPTLVPPPPPAP-PTIKPPPPPAPPTVEPPPPPPPAPPTVEPPPPPPPAPTKVEPP 462
Query: 863 PP 868
PP
Sbjct: 463 PP 464
>AE014296-2897|AAF49349.4| 926|Drosophila melanogaster CG13731-PA
protein.
Length = 926
Score = 29.5 bits (63), Expect = 7.3
Identities = 23/71 (32%), Positives = 23/71 (32%), Gaps = 4/71 (5%)
Frame = +2
Query: 668 PGTXGPXXALPXXNXR--PXXXPXPXXXPXXPAXXPTX*PFXFPTXFPPXXXXPXXLXPX 841
P T P LP N P P P PT P PT PP P P
Sbjct: 247 PTTRPPATYLPPTNKPLPPVTTRLPPPPPSPRTPPPTRPPTRPPTTRPPATYLPPTNKPL 306
Query: 842 P--XAXLXPPP 868
P L PPP
Sbjct: 307 PPVTTRLPPPP 317
>BT022850-1|AAY55266.1| 538|Drosophila melanogaster IP13040p
protein.
Length = 538
Score = 29.1 bits (62), Expect = 9.7
Identities = 22/67 (32%), Positives = 22/67 (32%)
Frame = -2
Query: 867 GGGXSXAXGXGXKXXGXXXXGGXXVGNXXGXXVGXXAGXXGXXXGXGKXXGRXLXXGRAX 688
G G G G G GG G G G G G G G GR G A
Sbjct: 170 GQGAGGGGGGGSGYGGGSGFGGGGAGGGSGGGGGGAGGGGGYGSGGGS--GR----GGAP 223
Query: 687 MGPXVPG 667
GP PG
Sbjct: 224 GGPGAPG 230
>AE013599-1243|AAF58688.1| 610|Drosophila melanogaster CG13214-PA,
isoform A protein.
Length = 610
Score = 29.1 bits (62), Expect = 9.7
Identities = 22/67 (32%), Positives = 22/67 (32%)
Frame = -2
Query: 867 GGGXSXAXGXGXKXXGXXXXGGXXVGNXXGXXVGXXAGXXGXXXGXGKXXGRXLXXGRAX 688
G G G G G GG G G G G G G G GR G A
Sbjct: 242 GQGAGGGGGGGSGYGGGSGFGGGGAGGGSGGGGGGAGGGGGYGSGGGS--GR----GGAP 295
Query: 687 MGPXVPG 667
GP PG
Sbjct: 296 GGPGAPG 302
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,247,519
Number of Sequences: 53049
Number of extensions: 520356
Number of successful extensions: 1270
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1241
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4894529517
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -