Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_H22
         (908 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   2.5  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   3.3  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    23   3.3  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   4.4  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   4.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   5.8  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   5.8  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = +2

Query: 569 GCSNIPDSGITRNWCRTHRCQST*LEPFHCIRERGGFHQSH 691
           GC +        N  + H    T  +PF C + RG F + H
Sbjct: 220 GCEHCSMKFSDSNQLKAHVLIHTNEKPFECDKCRGRFRRRH 260


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 235 WSPVCGTCCHNYDPRDHGGVQI 300
           WS +   C     P+  GGVQI
Sbjct: 38  WSDIADVCERFLAPKGFGGVQI 59


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +1

Query: 307 CGN*SNARCRYSNGGTCSTNKTDEDGCEVR 396
           C N    + RY+  GTC   +  E G +++
Sbjct: 62  CSNSPLRKARYTEKGTCKMGREIEVGYDLK 91


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 235 WSPVCGTCCHNYDPRDHGGVQI 300
           WS +   C     P+  GGVQI
Sbjct: 37  WSDIADECERFLAPKGFGGVQI 58


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 235 WSPVCGTCCHNYDPRDHGGVQI 300
           WS +   C     P+  GGVQI
Sbjct: 38  WSDIADECERFLAPKGFGGVQI 59


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -1

Query: 764 WLQIDCMIVNTVPILQQLFVCQI 696
           +L + C++ NT+ IL  + VC++
Sbjct: 280 FLPLLCILTNTLEILITVTVCEL 302


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -1

Query: 764 WLQIDCMIVNTVPILQQLFVCQI 696
           +L + C++ NT+ IL  + VC++
Sbjct: 105 FLPLLCILTNTLEILITVTVCEL 127


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,589
Number of Sequences: 336
Number of extensions: 4662
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25341085
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)