Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_H22
         (908 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81517-3|CAB04210.1|  802|Caenorhabditis elegans Hypothetical pr...    30   2.6  
AC006696-8|AAF39989.1|  120|Caenorhabditis elegans Hypothetical ...    28   8.0  

>Z81517-3|CAB04210.1|  802|Caenorhabditis elegans Hypothetical
           protein F28B1.3 protein.
          Length = 802

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 19/74 (25%), Positives = 33/74 (44%)
 Frame = +2

Query: 362 PIKLTKMDVKSVISMRYAHTAIVAHVRNAANKSQEANFXVLLPEHSFHQRICYDSGWKIL 541
           P K    D K +  + +A + I+AH  +    S  +      P+ +    +C DSGW+I 
Sbjct: 165 PKKKWTNDCKKLRPVCFAVSGILAHYADFFPYSALSVLRGFYPDLTLVTAVCVDSGWQIN 224

Query: 542 QSVRQRKERGCSNI 583
               Q  E  C+++
Sbjct: 225 GVKVQNPEVTCNSV 238


>AC006696-8|AAF39989.1|  120|Caenorhabditis elegans Hypothetical
           protein W08E12.2 protein.
          Length = 120

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +1

Query: 340 SNGGTCSTNKTDEDGCEVRDIYAIRSHGYCSAC 438
           +N   CS N  +  GC  R  Y   + GY S C
Sbjct: 60  NNNNGCSCNPCNGGGCAPRCSYCPNNFGYSSCC 92


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,638,637
Number of Sequences: 27780
Number of extensions: 421806
Number of successful extensions: 1153
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1153
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)