Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_H21
         (825 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0610 - 25449085-25453284                                         34   0.16 
09_03_0047 - 11867302-11867356,11867461-11868032,11868485-118688...    30   2.6  
10_08_0041 - 14374684-14377339,14377371-14378233                       28   7.8  
03_02_0149 + 5933134-5933207,5935039-5935267,5935370-5935468,593...    28   7.8  
01_06_1682 - 39130696-39131705,39132355-39132583                       28   7.8  

>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 26/52 (50%), Positives = 31/52 (59%)
 Frame = -3

Query: 376  PPGPKTLVP*A*PVSCPRSSLKISLL*PAFPKSPSSLCPKVPKTLPPPICLS 221
            PP  K+L P A PVS P   +K SL  P  P +P SL P V K+LPPP  +S
Sbjct: 1258 PPAVKSLPPPA-PVSLPPPPVK-SL--P--PPAPVSLPPPVVKSLPPPAPVS 1303


>09_03_0047 -
           11867302-11867356,11867461-11868032,11868485-11868873,
           11869018-11869331,11871028-11871382,11872004-11872076
          Length = 585

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +3

Query: 291 AGYNREIFNDDRGQLTGQAYGTRVLGPGGRQHQ 389
           A  NR +FN  RGQL  +A G +     G  HQ
Sbjct: 236 ASVNRIVFNSQRGQLKPRATGVQFTDENGGLHQ 268


>10_08_0041 - 14374684-14377339,14377371-14378233
          Length = 1172

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
 Frame = +3

Query: 156 DYAED-YSISGQSSRRHPRDVTWDKQMGGGKVFGTLGHNDDGLFGKAGYNREIFNDDRGQ 332
           D A+D   ++G   ++H  ++  D    G +    L   DDGL   AG   +  N     
Sbjct: 173 DDADDGLHLAGVGGKQH--NLVVDAGASGKQQKLVLDAADDGLH-LAGVGEKQHNLVLDA 229

Query: 333 LTGQAYGTRVLGPGGRQHQLRXDA*TGR 416
           +T    G  + G GG+QH L  DA TGR
Sbjct: 230 VTD---GLHLAGVGGKQHNLVLDAGTGR 254


>03_02_0149 +
           5933134-5933207,5935039-5935267,5935370-5935468,
           5935582-5935616,5935694-5935769,5936552-5936662,
           5937001-5937087,5937302-5937395,5937489-5937606,
           5938047-5938542,5939263-5939298,5940047-5940578,
           5940668-5940792
          Length = 703

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 20/62 (32%), Positives = 29/62 (46%)
 Frame = -3

Query: 535 PPAEKXGFYPDPTHRSLMLSXPDLPPNCLFRSIVACAXLVRPV*ASXRSWCCRPPGPKTL 356
           PP       P P  +S+    P  P N + R+   CA L +P+ A  +S    PP PK++
Sbjct: 544 PPPPPRNMLPPPP-KSMPPPPPKFPSNEMSRNEDRCADLNKPM-APPKS--MPPPPPKSM 599

Query: 355 VP 350
            P
Sbjct: 600 PP 601


>01_06_1682 - 39130696-39131705,39132355-39132583
          Length = 412

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -3

Query: 295 PAFPKSPSSLCPKVPKTLPPP 233
           P  PK+P  L PKVP  + PP
Sbjct: 349 PLLPKTPKYLPPKVPLEMSPP 369


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,864,554
Number of Sequences: 37544
Number of extensions: 396596
Number of successful extensions: 988
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)