Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_H21
(825 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S56138-1|AAA14245.1| 748|Homo sapiens choline acetyltransferase... 32 2.9
S45018-1|AAB23557.2| 559|Homo sapiens choline acetyltransferase... 32 2.9
BC130617-1|AAI30618.1| 630|Homo sapiens CHAT protein protein. 32 2.9
BC130615-1|AAI30616.1| 630|Homo sapiens CHAT protein protein. 32 2.9
AF305909-1|AAK08955.1| 630|Homo sapiens choline acetyltransfera... 32 2.9
AF305908-1|AAK08954.1| 666|Homo sapiens choline acetyltransfera... 32 2.9
AF305907-1|AAK08953.1| 748|Homo sapiens choline acetyltransfera... 32 2.9
AF305906-3|AAK08952.1| 630|Homo sapiens choline acetyltransfera... 32 2.9
AF305906-2|AAK08951.1| 666|Homo sapiens choline acetyltransfera... 32 2.9
AF305906-1|AAK08950.1| 748|Homo sapiens choline acetyltransfera... 32 2.9
AF321609-1|AAT09768.1| 834|Homo sapiens titin protein. 31 3.8
AK128588-1|BAC87514.1| 189|Homo sapiens protein ( Homo sapiens ... 30 8.8
AJ277892-6|CAD12460.1| 454|Homo sapiens Titin fetal Isoform pro... 30 8.8
>S56138-1|AAA14245.1| 748|Homo sapiens choline acetyltransferase
protein.
Length = 748
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +1
Query: 163 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDTTMMDSLEKL 294
RKI + A N L+TS G ++W EAR++ + D+T DSL+ +
Sbjct: 334 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381
>S45018-1|AAB23557.2| 559|Homo sapiens choline acetyltransferase
protein.
Length = 559
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +1
Query: 163 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDTTMMDSLEKL 294
RKI + A N L+TS G ++W EAR++ + D+T DSL+ +
Sbjct: 224 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 271
>BC130617-1|AAI30618.1| 630|Homo sapiens CHAT protein protein.
Length = 630
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +1
Query: 163 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDTTMMDSLEKL 294
RKI + A N L+TS G ++W EAR++ + D+T DSL+ +
Sbjct: 216 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>BC130615-1|AAI30616.1| 630|Homo sapiens CHAT protein protein.
Length = 630
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +1
Query: 163 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDTTMMDSLEKL 294
RKI + A N L+TS G ++W EAR++ + D+T DSL+ +
Sbjct: 216 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>AF305909-1|AAK08955.1| 630|Homo sapiens choline acetyltransferase
isoform R protein.
Length = 630
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +1
Query: 163 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDTTMMDSLEKL 294
RKI + A N L+TS G ++W EAR++ + D+T DSL+ +
Sbjct: 216 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>AF305908-1|AAK08954.1| 666|Homo sapiens choline acetyltransferase
isoform S protein.
Length = 666
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +1
Query: 163 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDTTMMDSLEKL 294
RKI + A N L+TS G ++W EAR++ + D+T DSL+ +
Sbjct: 252 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 299
>AF305907-1|AAK08953.1| 748|Homo sapiens choline acetyltransferase
isoform M protein.
Length = 748
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +1
Query: 163 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDTTMMDSLEKL 294
RKI + A N L+TS G ++W EAR++ + D+T DSL+ +
Sbjct: 334 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381
>AF305906-3|AAK08952.1| 630|Homo sapiens choline acetyltransferase
isoform R protein.
Length = 630
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +1
Query: 163 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDTTMMDSLEKL 294
RKI + A N L+TS G ++W EAR++ + D+T DSL+ +
Sbjct: 216 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>AF305906-2|AAK08951.1| 666|Homo sapiens choline acetyltransferase
isoform S protein.
Length = 666
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +1
Query: 163 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDTTMMDSLEKL 294
RKI + A N L+TS G ++W EAR++ + D+T DSL+ +
Sbjct: 252 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 299
>AF305906-1|AAK08950.1| 748|Homo sapiens choline acetyltransferase
isoform M protein.
Length = 748
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +1
Query: 163 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDTTMMDSLEKL 294
RKI + A N L+TS G ++W EAR++ + D+T DSL+ +
Sbjct: 334 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381
>AF321609-1|AAT09768.1| 834|Homo sapiens titin protein.
Length = 834
Score = 31.5 bits (68), Expect = 3.8
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -3
Query: 376 PPGPKTLVP*A*PVSCPRSSLKISLL*PAFPKSPSSLCPKVPKTLPP 236
PP K VP P++++ L A P P S P+VP+ LPP
Sbjct: 468 PPPKKPEVPPTKVPEVPKAAVPEKKLPEAIPPKPESPPPEVPEVLPP 514
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -3
Query: 376 PPGPKTLVP*A*PVSCPRSSLKISLL*PAFPKSPSSLCPKVPKTLPP 236
PP K VP P++++ + A P P S P+VP+ LPP
Sbjct: 665 PPPKKPEVPPTKVPEVPKAAVPEKKVPEAIPPKPESPPPEVPEVLPP 711
>AK128588-1|BAC87514.1| 189|Homo sapiens protein ( Homo sapiens
cDNA FLJ46747 fis, clone TRACH3022198. ).
Length = 189
Score = 30.3 bits (65), Expect = 8.8
Identities = 24/86 (27%), Positives = 36/86 (41%)
Frame = -3
Query: 481 LSXPDLPPNCLFRSIVACAXLVRPV*ASXRSWCCRPPGPKTLVP*A*PVSCPRSSLKISL 302
L P P CL ++ +C+ P +S C +P P LVP + P S + L
Sbjct: 39 LQIPGRPRRCLLGAMSSCSASSCPRKSSGVQGCPKPAAPSRLVPPILDIWAPLSPKTLPL 98
Query: 301 L*PAFPKSPSSLCPKVPKTLPPPICL 224
P S+C V +LP +C+
Sbjct: 99 ------GGPRSVC--VSFSLPACLCI 116
>AJ277892-6|CAD12460.1| 454|Homo sapiens Titin fetal Isoform
protein.
Length = 454
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -3
Query: 376 PPGPKTLVP*A*PVSCPRSSLKISLL*PAFPKSPSSLCPKVPKTLPP 236
PP K VP P++++ + A P P S P+VP+ LPP
Sbjct: 302 PPPKKPEVPPTKVPEVPKAAVPEKKVPEAIPPKPESPPPEVPEVLPP 348
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,382,948
Number of Sequences: 237096
Number of extensions: 2071173
Number of successful extensions: 8358
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8295
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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