Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_H21
         (825 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83228-8|CAE17820.2|  358|Caenorhabditis elegans Hypothetical pr...    32   0.57 
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ...    30   2.3  
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ...    30   2.3  
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ...    30   2.3  
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.      30   2.3  
AC006809-3|AAY86286.1|  558|Caenorhabditis elegans Hypothetical ...    30   2.3  
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr...    29   3.1  
U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (gr...    29   4.0  
AF039720-9|AAK68360.2|  676|Caenorhabditis elegans Hypothetical ...    29   5.3  
Z81568-11|CAB04593.1|  681|Caenorhabditis elegans Hypothetical p...    28   9.3  
AF000193-3|AAB52890.1|  259|Caenorhabditis elegans Hypothetical ...    28   9.3  

>Z83228-8|CAE17820.2|  358|Caenorhabditis elegans Hypothetical
           protein F52F12.9 protein.
          Length = 358

 Score = 31.9 bits (69), Expect = 0.57
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = -2

Query: 170 IFRVIRRSVNFCVNTHQSCSEDIKQICI--HFELYQVSLLKTECPNLKDS 27
           IF VI+ + NFC+   +   E+     +  HFE     ++  ECP+ KD+
Sbjct: 32  IFFVIQATSNFCLQEKELTDEEFYDAVLMKHFENKNNKVIAAECPDPKDN 81


>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
           protein Y47H9C.4c protein.
          Length = 1045

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 303 CCNQLFQRVHHRCVPKCQRPC 241
           CC+  +Q   H C+P C  PC
Sbjct: 105 CCDGYYQTKDHFCLPDCNPPC 125


>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
           protein Y47H9C.4b protein.
          Length = 1070

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 303 CCNQLFQRVHHRCVPKCQRPC 241
           CC+  +Q   H C+P C  PC
Sbjct: 105 CCDGYYQTKDHFCLPDCNPPC 125


>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
           protein Y47H9C.4a protein.
          Length = 1111

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 303 CCNQLFQRVHHRCVPKCQRPC 241
           CC+  +Q   H C+P C  PC
Sbjct: 105 CCDGYYQTKDHFCLPDCNPPC 125


>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
          Length = 1111

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 303 CCNQLFQRVHHRCVPKCQRPC 241
           CC+  +Q   H C+P C  PC
Sbjct: 105 CCDGYYQTKDHFCLPDCNPPC 125


>AC006809-3|AAY86286.1|  558|Caenorhabditis elegans Hypothetical
           protein Y5H2A.4 protein.
          Length = 558

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 300 CNQLFQRVHHRCVPKCQRPCLP 235
           C Q  Q+ H +C+P+CQ+P  P
Sbjct: 436 CQQT-QQCHQQCIPQCQQPAAP 456


>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
            T04F3.1 protein.
          Length = 3517

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +1

Query: 367  DLEGDSTNYGXTPRLGEPXMHKPLLT*IDNSVADLGMXASGSGVWDLDKTP 519
            D   +S +   T ++ EP M KPL   +DN + +L   A+     +  KTP
Sbjct: 2537 DSFNNSFSKSNTSQVYEPRMRKPLTLPVDNWIDNLVSEATNEATKEAPKTP 2587


>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
            T04F3.1 protein.
          Length = 3517

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +1

Query: 367  DLEGDSTNYGXTPRLGEPXMHKPLLT*IDNSVADLGMXASGSGVWDLDKTP 519
            D   +S +   T ++ EP M KPL   +DN + +L   A+     +  KTP
Sbjct: 2537 DSFNNSFSKSNTSQVYEPRMRKPLTLPVDNWIDNLVSEATNEATKEAPKTP 2587


>U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (grd
           related) protein 4 protein.
          Length = 210

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 17/52 (32%), Positives = 21/52 (40%)
 Frame = -3

Query: 382 CRPPGPKTLVP*A*PVSCPRSSLKISLL*PAFPKSPSSLCPKVPKTLPPPIC 227
           C PP P    P   P+ CP   +      P     P  +CP  P   PPP+C
Sbjct: 30  CPPPPPPMCAPP--PLPCPPPPICPPQFCP-----PPPMCPPPPPPPPPPMC 74


>AF039720-9|AAK68360.2|  676|Caenorhabditis elegans Hypothetical
           protein F33D11.9b protein.
          Length = 676

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 15/57 (26%), Positives = 29/57 (50%)
 Frame = -1

Query: 306 LCCNQLFQRVHHRCVPKCQRPCLPPFVCPK*RHEGVALRIAR*SSNLPRNQKVRKLL 136
           L    LF  V+       +   +P  V PK    G+A+++ R  S+LP+++  ++L+
Sbjct: 53  LSAQWLFDPVNMEVTRISEHSLMPGLVTPKFDKSGIAIQLYRRFSDLPKSKSQQELI 109


>Z81568-11|CAB04593.1|  681|Caenorhabditis elegans Hypothetical
           protein K08E3.6 protein.
          Length = 681

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = -1

Query: 351 RKPDRLVARGRH*RSLCCNQLFQRVHHRCVPKCQRPCLP 235
           RK D+     +   S+ C    Q VH  C  K   PC+P
Sbjct: 363 RKCDKCATALKLATSMKCRDCHQVVHRSCCNKLHLPCIP 401


>AF000193-3|AAB52890.1|  259|Caenorhabditis elegans Hypothetical
           protein T20B6.3 protein.
          Length = 259

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = +3

Query: 234 GGGKVFGTLGHNDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGG 377
           GGG   G  G   DG +G  G+         G + G  YG   +G GG
Sbjct: 167 GGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGG 214


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,287,707
Number of Sequences: 27780
Number of extensions: 303019
Number of successful extensions: 928
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)