Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_H21
         (825 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    23   2.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   2.6  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    22   7.9  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   7.9  
AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength rhodo...    22   7.9  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   7.9  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   7.9  

>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = +3

Query: 297 YNREIFNDDRGQLTGQAYGTRVLGPG--GRQH 386
           Y + ++  D+  +TG AYG   + PG   RQH
Sbjct: 60  YKQRVY--DKNGMTGDAYGGLNIRPGQPSRQH 89


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +1

Query: 301 TERSLMTTAGN*PVRLTAPE 360
           TE +  T  G  PVR TAPE
Sbjct: 789 TEGAYTTRGGKIPVRWTAPE 808


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 506 WIKPPLFCRWYGXQG 550
           W+  PLFC+ Y   G
Sbjct: 118 WVLGPLFCQIYAMLG 132


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 140 FCVNTHQSCSEDIKQICIHFELYQVSLLKTE 48
           + VNT Q  + D +Q  IH+E  Q ++L T+
Sbjct: 276 YYVNTEQFRTSDYQQNDIHYEGVQ-NILDTQ 305


>AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 506 WIKPPLFCRWYGXQG 550
           W+  PLFC+ Y   G
Sbjct: 84  WVLGPLFCQIYAMLG 98


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 140 FCVNTHQSCSEDIKQICIHFELYQVSLLKTE 48
           + VNT Q  + D +Q  IH+E  Q ++L T+
Sbjct: 276 YYVNTEQFRTSDYQQNDIHYEGVQ-NILDTQ 305


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 140 FCVNTHQSCSEDIKQICIHFELYQVSLLKTE 48
           + VNT Q  + D +Q  IH+E  Q ++L T+
Sbjct: 276 YYVNTEQFRTSDYQQNDIHYEGVQ-NILDTQ 305


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,495
Number of Sequences: 438
Number of extensions: 3811
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)