Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_H20
         (1147 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    27   1.0  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   9.6  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 27.1 bits (57), Expect = 1.0
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -1

Query: 754 GXGXPXPPPPPXXKXXXGXXPPPPT 680
           G G P PPPPP          P PT
Sbjct: 779 GIGSPPPPPPPPPSSLSPGGVPRPT 803



 Score = 26.2 bits (55), Expect = 1.8
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -1

Query: 742 PXPPPPPXXKXXXGXXPPPPTKKK 671
           P PPPPP      G  P P   +K
Sbjct: 784 PPPPPPPPSSLSPGGVPRPTVLQK 807



 Score = 24.6 bits (51), Expect = 5.5
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 755 GXGXPXPPPPP 723
           G G P PPPPP
Sbjct: 779 GIGSPPPPPPP 789



 Score = 23.8 bits (49), Expect = 9.6
 Identities = 11/29 (37%), Positives = 12/29 (41%)
 Frame = -1

Query: 760 GGGXGXPXPPPPPXXKXXXGXXPPPPTKK 674
           G G   P PPPPP      G   P   +K
Sbjct: 779 GIGSPPPPPPPPPSSLSPGGVPRPTVLQK 807


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 9.6
 Identities = 10/24 (41%), Positives = 10/24 (41%)
 Frame = +3

Query: 684 GGGGXXPXXXFXXGGGGGXGXPXP 755
           G GG         GGGG  G P P
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGP 224


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 489,096
Number of Sequences: 2352
Number of extensions: 8500
Number of successful extensions: 29
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 128755305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)