Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_H20
(1147 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 37 0.023
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 37 0.023
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 37 0.023
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.29
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.38
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.38
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 33 0.50
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 33 0.50
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 33 0.50
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 32 0.66
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 32 0.87
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 31 1.5
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 31 1.5
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 31 1.5
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 31 1.5
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 31 1.5
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.5
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.5
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.5
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 31 1.5
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 31 1.5
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 30 3.5
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 30 3.5
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 30 3.5
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 29 4.7
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 29 4.7
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 29 4.7
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 6.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 6.2
AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical ... 29 6.2
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 29 8.1
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 8.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 8.1
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 8.1
U39676-3|AAB37032.2| 941|Caenorhabditis elegans Hypothetical pr... 29 8.1
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 29 8.1
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 8.1
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.1 bits (82), Expect = 0.023
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -1
Query: 823 PPPPXPXXEXXXXXXXXXXXXGGGXGXPXPPPPPXXKXXXGXXPPPP 683
PPPP P G P PPPPP G PPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 36.3 bits (80), Expect = 0.041
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -1
Query: 823 PPPPXPXXEXXXXXXXXXXXXGGGXGXPXPPPPPXXKXXXGXXPPPP 683
PPPP P G P PPPPP G PPPP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 33.1 bits (72), Expect = 0.38
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = -3
Query: 749 GXPXPPPPPXXKXXXGXXXXPPNXKKKXXXXXXGXGGGXXXXXXPPXXXXXXPPPPXXGG 570
G P PPPPP PP GG PP PPPP GG
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPP----PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 31.9 bits (69), Expect = 0.87
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 3/49 (6%)
Frame = -1
Query: 820 PPPXPXXEXXXXXXXXXXXXGGGX---GXPXPPPPPXXKXXXGXXPPPP 683
PPP P GG G P PPPPP PPPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 821 PPPXPXXXXXXXXXXXXXXXGGGXGXPXPPPPP 723
PPP P GG G P PPPPP
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 820 PPPXPXXEXXXXXXXXXXXXGGGXGXPXPPPPP 722
PPP P GG G P PPPPP
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.1 bits (82), Expect = 0.023
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -1
Query: 823 PPPPXPXXEXXXXXXXXXXXXGGGXGXPXPPPPPXXKXXXGXXPPPP 683
PPPP P G P PPPPP G PPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 36.3 bits (80), Expect = 0.041
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -1
Query: 823 PPPPXPXXEXXXXXXXXXXXXGGGXGXPXPPPPPXXKXXXGXXPPPP 683
PPPP P G P PPPPP G PPPP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 33.1 bits (72), Expect = 0.38
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = -3
Query: 749 GXPXPPPPPXXKXXXGXXXXPPNXKKKXXXXXXGXGGGXXXXXXPPXXXXXXPPPPXXGG 570
G P PPPPP PP GG PP PPPP GG
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPP----PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 31.9 bits (69), Expect = 0.87
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 3/49 (6%)
Frame = -1
Query: 820 PPPXPXXEXXXXXXXXXXXXGGGX---GXPXPPPPPXXKXXXGXXPPPP 683
PPP P GG G P PPPPP PPPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 821 PPPXPXXXXXXXXXXXXXXXGGGXGXPXPPPPP 723
PPP P GG G P PPPPP
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 820 PPPXPXXEXXXXXXXXXXXXGGGXGXPXPPPPP 722
PPP P GG G P PPPPP
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.1 bits (82), Expect = 0.023
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -1
Query: 823 PPPPXPXXEXXXXXXXXXXXXGGGXGXPXPPPPPXXKXXXGXXPPPP 683
PPPP P G P PPPPP G PPPP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 36.3 bits (80), Expect = 0.041
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -1
Query: 823 PPPPXPXXEXXXXXXXXXXXXGGGXGXPXPPPPPXXKXXXGXXPPPP 683
PPPP P G P PPPPP G PPPP
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 33.1 bits (72), Expect = 0.38
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = -3
Query: 749 GXPXPPPPPXXKXXXGXXXXPPNXKKKXXXXXXGXGGGXXXXXXPPXXXXXXPPPPXXGG 570
G P PPPPP PP GG PP PPPP GG
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPP----PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Score = 31.9 bits (69), Expect = 0.87
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 3/49 (6%)
Frame = -1
Query: 820 PPPXPXXEXXXXXXXXXXXXGGGX---GXPXPPPPPXXKXXXGXXPPPP 683
PPP P GG G P PPPPP PPPP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 344
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 821 PPPXPXXXXXXXXXXXXXXXGGGXGXPXPPPPP 723
PPP P GG G P PPPPP
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 820 PPPXPXXEXXXXXXXXXXXXGGGXGXPXPPPPP 722
PPP P GG G P PPPPP
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 33.5 bits (73), Expect = 0.29
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = -1
Query: 820 PPPXPXXEXXXXXXXXXXXXGGGXGXPXPPPPPXXKXXXGXXPPPP 683
PPP G P PPPPP + G PPPP
Sbjct: 535 PPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPP 580
Score = 29.9 bits (64), Expect = 3.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 748 GXPXPPPPPXXKXXXGXXPPPP 683
G P PPPPP PPPP
Sbjct: 574 GAPPPPPPPPPMLGGPPPPPPP 595
Score = 23.8 bits (49), Expect(2) = 6.5
Identities = 10/33 (30%), Positives = 10/33 (30%)
Frame = -3
Query: 821 PPPXPXXXXXXXXXXXXXXXGGGXGXPXPPPPP 723
P P P G P PPPPP
Sbjct: 533 PAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPP 565
Score = 23.4 bits (48), Expect(2) = 6.5
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -3
Query: 749 GXPXPPPPPXXKXXXGXXXXPP 684
G P PPPPP PP
Sbjct: 574 GAPPPPPPPPPMLGGPPPPPPP 595
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.1 bits (72), Expect = 0.38
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 754 GXGXPXPPPPPXXKXXXGXXPPPPTK 677
G G PPPPP + G PPPP +
Sbjct: 329 GMGGMPPPPPPGMRYPGGMPPPPPPR 354
Score = 30.7 bits (66), Expect = 2.0
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 4/54 (7%)
Frame = -1
Query: 823 PPPPXPXXEXXXXXXXXXXXXGGGX----GXPXPPPPPXXKXXXGXXPPPPTKK 674
PPPP P G G P PPPP G PPPP +
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSR 370
Score = 29.5 bits (63), Expect = 4.7
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 3/50 (6%)
Frame = -1
Query: 823 PPPPXPXXEXXXXXXXXXXXXGGGXGX-PXPPP--PPXXKXXXGXXPPPP 683
PPPP G G P PPP PP G PPPP
Sbjct: 336 PPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 385
Score = 28.7 bits (61), Expect = 8.1
Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Frame = -1
Query: 841 GXXXKXPPPPXPXXEXXXXXXXXXXXXG--GGXGXPXPPPPP-XXKXXXGXXPPPP 683
G + PPPP G G G P PPPP G PPPP
Sbjct: 282 GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 337
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.1 bits (72), Expect = 0.38
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 754 GXGXPXPPPPPXXKXXXGXXPPPPTK 677
G G PPPPP + G PPPP +
Sbjct: 339 GMGGMPPPPPPGMRYPGGMPPPPPPR 364
Score = 30.7 bits (66), Expect = 2.0
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 4/54 (7%)
Frame = -1
Query: 823 PPPPXPXXEXXXXXXXXXXXXGGGX----GXPXPPPPPXXKXXXGXXPPPPTKK 674
PPPP P G G P PPPP G PPPP +
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSR 380
Score = 29.5 bits (63), Expect = 4.7
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 3/50 (6%)
Frame = -1
Query: 823 PPPPXPXXEXXXXXXXXXXXXGGGXGX-PXPPP--PPXXKXXXGXXPPPP 683
PPPP G G P PPP PP G PPPP
Sbjct: 346 PPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 395
Score = 28.7 bits (61), Expect = 8.1
Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Frame = -1
Query: 841 GXXXKXPPPPXPXXEXXXXXXXXXXXXG--GGXGXPXPPPPP-XXKXXXGXXPPPP 683
G + PPPP G G G P PPPP G PPPP
Sbjct: 292 GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 347
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 32.7 bits (71), Expect = 0.50
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 748 GXPXPPPPPXXKXXXGXXPPPP 683
G P PPPPP G PPPP
Sbjct: 534 GAPTPPPPPPVGMANGGPPPPP 555
Score = 28.7 bits (61), Expect = 8.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 736 PPPPPXXKXXXGXXPPPP 683
PPPPP G PPPP
Sbjct: 539 PPPPPVGMANGGPPPPPP 556
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 32.7 bits (71), Expect = 0.50
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -1
Query: 823 PPPPXPXXEXXXXXXXXXXXXGGGXGXPXPPPPPXXKXXXGXXPPPP 683
PPPP P P PPPPP G PPPP
Sbjct: 767 PPPPPPPPHCEPTMVHVEFTPPSTSSVP-PPPPPLPPISSGAPPPPP 812
Score = 31.9 bits (69), Expect = 0.87
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = -1
Query: 823 PPPPXPXXEXXXXXXXXXXXXGGGXGXPXPPPPPXXKXXXGXXPPPP 683
PPPP P E P PP PP PPPP
Sbjct: 769 PPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPP 815
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 32.7 bits (71), Expect = 0.50
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -1
Query: 823 PPPPXPXXEXXXXXXXXXXXXGGGXGXPXPPPPPXXKXXXGXXPPPP 683
PPPP P P PPPPP G PPPP
Sbjct: 767 PPPPPPPPHCEPTMVHVEFTPPSTSSVP-PPPPPLPPISSGAPPPPP 812
Score = 31.9 bits (69), Expect = 0.87
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = -1
Query: 823 PPPPXPXXEXXXXXXXXXXXXGGGXGXPXPPPPPXXKXXXGXXPPPP 683
PPPP P E P PP PP PPPP
Sbjct: 769 PPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPP 815
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 32.3 bits (70), Expect = 0.66
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 4/51 (7%)
Frame = +3
Query: 684 GGGGXXPXXXFXXGGGGGXGX----PXPPPXXXXXXXXXXXXSXXGXGGGG 824
GGGG GGGGG G P PPP G GGGG
Sbjct: 87 GGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGG 137
Score = 30.7 bits (66), Expect = 2.0
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +3
Query: 687 GGGXXPXXXFXXGGGGGXGXPXPPPXXXXXXXXXXXXSXXGXGGGG 824
GGG GGG G G PPP G GGGG
Sbjct: 33 GGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGG 78
Score = 28.7 bits (61), Expect = 8.1
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +3
Query: 684 GGGGXXPXXXFXXGGGGGXGXPXPPPXXXXXXXXXXXXSXXGXGGGG 824
GG G GGGGG G PP G GGGG
Sbjct: 30 GGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGG 76
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 31.9 bits (69), Expect = 0.87
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 760 GGGXGXPXPPPPPXXKXXXGXXPPPP 683
G P PPPPP G PPPP
Sbjct: 116 GDHEASPPPPPPPRKSRAGGSSPPPP 141
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 684 GGGGXXPXXXFXXGGGGGXGXPXPP 758
GGGG P GGGG G P PP
Sbjct: 622 GGGGGPPRGPGGGGGGGPTGPPAPP 646
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 31.1 bits (67), Expect = 1.5
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = -1
Query: 820 PPPXPXXEXXXXXXXXXXXXGGGXGXPXPPPPPXXKXXXGXXPPP 686
PPP + G G PPPPP + G PPP
Sbjct: 652 PPPQQQQQHQAQQAQSQAHYGPPGGGQGPPPPPQGQQYYGGPPPP 696
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 31.1 bits (67), Expect = 1.5
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 4/51 (7%)
Frame = -1
Query: 823 PPPPXPXXEXXXXXXXXXXXXGGGXGXPX----PPPPPXXKXXXGXXPPPP 683
PPPP P GG PPPPP G PPPP
Sbjct: 201 PPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPP 251
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 31.1 bits (67), Expect = 1.5
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = -1
Query: 820 PPPXPXXEXXXXXXXXXXXXGGGXGXPXPPPPPXXKXXXGXXPPP 686
PPP + G G PPPPP + G PPP
Sbjct: 652 PPPQQQQQHQAQQAQSQAHYGPPGGGQGPPPPPQGQQYYGGPPPP 696
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 684 GGGGXXPXXXFXXGGGGGXGXPXPP 758
GGGG P GGGG G P PP
Sbjct: 622 GGGGGPPRGPGGGGGGGPTGPPAPP 646
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 1.5
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 6/52 (11%)
Frame = -1
Query: 823 PPPPXPXXEXXXXXXXXXXXXGGGX------GXPXPPPPPXXKXXXGXXPPP 686
PPPP GG G P PPPPP G PPP
Sbjct: 264 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 315
Score = 30.3 bits (65), Expect = 2.7
Identities = 18/60 (30%), Positives = 18/60 (30%)
Frame = -3
Query: 749 GXPXPPPPPXXKXXXGXXXXPPNXKKKXXXXXXGXGGGXXXXXXPPXXXXXXPPPPXXGG 570
G P PPPPP PP G PP PPPP GG
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS-------PPPPPTGSPPPPPAGG 287
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 1.5
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 6/52 (11%)
Frame = -1
Query: 823 PPPPXPXXEXXXXXXXXXXXXGGGX------GXPXPPPPPXXKXXXGXXPPP 686
PPPP GG G P PPPPP G PPP
Sbjct: 285 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 336
Score = 30.3 bits (65), Expect = 2.7
Identities = 18/60 (30%), Positives = 18/60 (30%)
Frame = -3
Query: 749 GXPXPPPPPXXKXXXGXXXXPPNXKKKXXXXXXGXGGGXXXXXXPPXXXXXXPPPPXXGG 570
G P PPPPP PP G PP PPPP GG
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS-------PPPPPTGSPPPPPAGG 308
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 1.5
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 6/52 (11%)
Frame = -1
Query: 823 PPPPXPXXEXXXXXXXXXXXXGGGX------GXPXPPPPPXXKXXXGXXPPP 686
PPPP GG G P PPPPP G PPP
Sbjct: 270 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 321
Score = 30.3 bits (65), Expect = 2.7
Identities = 18/60 (30%), Positives = 18/60 (30%)
Frame = -3
Query: 749 GXPXPPPPPXXKXXXGXXXXPPNXKKKXXXXXXGXGGGXXXXXXPPXXXXXXPPPPXXGG 570
G P PPPPP PP G PP PPPP GG
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS-------PPPPPTGSPPPPPAGG 293
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 31.1 bits (67), Expect = 1.5
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 4/51 (7%)
Frame = -1
Query: 823 PPPPXPXXEXXXXXXXXXXXXGGGXGXPX----PPPPPXXKXXXGXXPPPP 683
PPPP P GG PPPPP G PPPP
Sbjct: 187 PPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPP 237
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 31.1 bits (67), Expect = 1.5
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 4/51 (7%)
Frame = -1
Query: 823 PPPPXPXXEXXXXXXXXXXXXGGGXGXPX----PPPPPXXKXXXGXXPPPP 683
PPPP P GG PPPPP G PPPP
Sbjct: 187 PPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPP 237
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.9 bits (64), Expect = 3.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 760 GGGXGXPXPPPPPXXKXXXGXXPPPP 683
GGG P P PPP PPPP
Sbjct: 654 GGGSSMPMPVPPPGGLGGFMPPPPPP 679
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.9 bits (64), Expect = 3.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 760 GGGXGXPXPPPPPXXKXXXGXXPPPP 683
GGG P P PPP PPPP
Sbjct: 654 GGGSSMPMPVPPPGGLGGFMPPPPPP 679
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.9 bits (64), Expect = 3.5
Identities = 22/81 (27%), Positives = 23/81 (28%)
Frame = -1
Query: 823 PPPPXPXXEXXXXXXXXXXXXGGGXGXPXPPPPPXXKXXXGXXPPPPTKKKXXXXXXXGX 644
PPP G G PPPPP G PPPPT + G
Sbjct: 98 PPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGT---GSPPPPPTGE---PQDLSGE 151
Query: 643 GGGXXFXXXPXXXXXXXXPPP 581
G P PPP
Sbjct: 152 GNASRRPPPPPKGTGSPPPPP 172
Score = 29.5 bits (63), Expect = 4.7
Identities = 23/84 (27%), Positives = 24/84 (28%)
Frame = -1
Query: 823 PPPPXPXXEXXXXXXXXXXXXGGGXGXPXPPPPPXXKXXXGXXPPPPTKKKXXXXXXXGX 644
PPP G G PPPPP G PPPPT +
Sbjct: 222 PPPKGTGSPTPPPTGEPQDLSGEGNASRRPPPPPKGT---GSPPPPPTGEPQDL-----S 273
Query: 643 GGGXXFXXXPXXXXXXXXPPPGXG 572
G G P PPP G
Sbjct: 274 GEGNASRRPPPPPKGTGTPPPPTG 297
Score = 29.1 bits (62), Expect = 6.2
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -1
Query: 823 PPPPXPXXEXXXXXXXXXXXXGGGXGXPXPPPPPXXKXXXGXXPPPPT 680
PPP G G PPPPP G PPPPT
Sbjct: 35 PPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGT---GTPPPPPT 79
Score = 29.1 bits (62), Expect = 6.2
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -1
Query: 823 PPPPXPXXEXXXXXXXXXXXXGGGXGXPXPPPPPXXKXXXGXXPPPPT 680
PPP G G PPPPP G PPPPT
Sbjct: 129 PPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGT---GSPPPPPT 173
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 29.5 bits (63), Expect = 4.7
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -1
Query: 760 GGGXGXPXPPPPPXXKXXXGXXPPPP 683
GGG G PPPPP PPPP
Sbjct: 44 GGGFG---PPPPPFGPVGYALPPPPP 66
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -1
Query: 754 GXGXPXPPPPPXXKXXXGXXPPPP 683
G G P PPPPP PPP
Sbjct: 1008 GPGGPPPPPPPPPADFFANIAPPP 1031
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -1
Query: 757 GGXGXPXPPPPPXXKXXXGXXPPP 686
G G P PPPPP PPP
Sbjct: 1008 GPGGPPPPPPPPPADFFANIAPPP 1031
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -1
Query: 754 GXGXPXPPPPPXXKXXXGXXPPPP 683
G G P PPPPP PPP
Sbjct: 247 GPGGPPPPPPPPPADFFANIAPPP 270
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -1
Query: 757 GGXGXPXPPPPPXXKXXXGXXPPP 686
G G P PPPPP PPP
Sbjct: 247 GPGGPPPPPPPPPADFFANIAPPP 270
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.1 bits (62), Expect = 6.2
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = -1
Query: 823 PPPPXPXXEXXXXXXXXXXXXGGGXGXPXPPPPPXXKXXXGXXPPPP 683
PPPP P + P PPPPP G PPP
Sbjct: 610 PPPPPPPPQSFGMAPI-----SSAAPPPPPPPPPMGLPAVGAGAPPP 651
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.1 bits (62), Expect = 6.2
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = -1
Query: 823 PPPPXPXXEXXXXXXXXXXXXGGGXGXPXPPPPPXXKXXXGXXPPPP 683
PPPP P + P PPPPP G PPP
Sbjct: 436 PPPPPPPPQSFGMAPI-----SSAAPPPPPPPPPMGLPAVGAGAPPP 477
>AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical
protein C02E7.6 protein.
Length = 70
Score = 29.1 bits (62), Expect = 6.2
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 760 GGGXGXPXPPPPPXXKXXXGXXPPPP 683
GGG G PPPP G PPP
Sbjct: 22 GGGGGCGCAPPPPPACGCGGGAAPPP 47
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 28.7 bits (61), Expect = 8.1
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1
Query: 742 PXPPPPPXXKXXXGXXPPPP 683
P PPPPP + PPPP
Sbjct: 476 PPPPPPPPPENEPEEFPPPP 495
Score = 28.7 bits (61), Expect = 8.1
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 742 PXPPPPPXXKXXXGXXPPPPT 680
P PPPPP PPPP+
Sbjct: 477 PPPPPPPPENEPEEFPPPPPS 497
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 8.1
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Frame = +3
Query: 573 PXP-GGGXXXXXXXXGXXXXXXPPPXPXXXXXXFFFXVGGGGXXPXXXFXXGGGGGXG 743
P P GGG G PPP P GGGG GGGGG G
Sbjct: 52 PAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCG-----GGGGGCGGGGGGCGGGGGCG 104
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 8.1
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Frame = +3
Query: 573 PXP-GGGXXXXXXXXGXXXXXXPPPXPXXXXXXFFFXVGGGGXXPXXXFXXGGGGGXG 743
P P GGG G PPP P GGGG GGGGG G
Sbjct: 52 PAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCG-----GGGGGCGGGGGGCGGGGGCG 104
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.7 bits (61), Expect = 8.1
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 5/29 (17%)
Frame = -1
Query: 754 GXGXPXPPPPP-----XXKXXXGXXPPPP 683
G G P PPPPP + G PPPP
Sbjct: 766 GVGVPPPPPPPSAIPLPPRLQGGIPPPPP 794
>U39676-3|AAB37032.2| 941|Caenorhabditis elegans Hypothetical
protein C23F12.2 protein.
Length = 941
Score = 28.7 bits (61), Expect = 8.1
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 742 PXPPPPPXXKXXXGXXPPPP 683
P PPPPP PPPP
Sbjct: 587 PIPPPPPTLAQSSSNIPPPP 606
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 28.7 bits (61), Expect = 8.1
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 5/31 (16%)
Frame = -1
Query: 760 GGGXGXPXPPP-----PPXXKXXXGXXPPPP 683
GGG G PPP PP G PPPP
Sbjct: 26 GGGCGCGAPPPPPACAPPPAPACGGGAPPPP 56
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.7 bits (61), Expect = 8.1
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 5/29 (17%)
Frame = -1
Query: 754 GXGXPXPPPPP-----XXKXXXGXXPPPP 683
G G P PPPPP + G PPPP
Sbjct: 766 GVGVPPPPPPPSAIPLPPRLQGGIPPPPP 794
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,951,631
Number of Sequences: 27780
Number of extensions: 266501
Number of successful extensions: 2634
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1849
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3109468484
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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