Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_H19
(856 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P09334 Cluster: Low molecular 30 kDa lipoprotein PBMHP-... 223 4e-57
UniRef50_P09335 Cluster: Low molecular 30 kDa lipoprotein PBMHP-... 95 2e-18
UniRef50_Q75RW3 Cluster: BmLSP-T; n=2; Bombyx mori|Rep: BmLSP-T ... 79 2e-13
UniRef50_Q00802 Cluster: Low molecular mass 30 kDa lipoprotein 1... 79 2e-13
UniRef50_P19616 Cluster: Microvitellogenin precursor; n=3; Mandu... 78 3e-13
UniRef50_Q2PQU4 Cluster: Putative paralytic peptide-binding prot... 63 7e-09
UniRef50_Q76IB6 Cluster: Growth blocking peptide binding protein... 59 2e-07
UniRef50_Q3EAX7 Cluster: Uncharacterized protein At3g29080.1; n=... 34 4.0
UniRef50_Q06G81 Cluster: Putative uncharacterized protein; n=1; ... 34 5.3
UniRef50_Q7SCR0 Cluster: Predicted protein; n=1; Neurospora cras... 34 5.3
UniRef50_UPI0000E80401 Cluster: PREDICTED: hypothetical protein;... 33 6.9
UniRef50_Q8I123 Cluster: Putative uncharacterized protein; n=1; ... 33 6.9
UniRef50_Q55PE8 Cluster: Putative uncharacterized protein; n=2; ... 33 6.9
UniRef50_Q189A8 Cluster: Putative iron-sulfur cluster protein; n... 33 9.2
UniRef50_Q23036 Cluster: Putative uncharacterized protein; n=1; ... 33 9.2
>UniRef50_P09334 Cluster: Low molecular 30 kDa lipoprotein PBMHP-6
precursor; n=2; Bombyx mori|Rep: Low molecular 30 kDa
lipoprotein PBMHP-6 precursor - Bombyx mori (Silk moth)
Length = 256
Score = 223 bits (545), Expect = 4e-57
Identities = 122/198 (61%), Positives = 130/198 (65%), Gaps = 1/198 (0%)
Frame = +1
Query: 172 VLAEQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMELRLPVMDKG 351
VLAEQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTM+ + K
Sbjct: 28 VLAEQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTK- 86
Query: 352 WKGNRQILLPHPV*SDLHRADCQAHKQKGPSRPQVDRXTKPQQNCIXXXXXXXXXXXXXX 531
G + P+ + + + + N I
Sbjct: 87 -DGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHALKLIDQQNHNKIAFGDSKDKTSKKVS 145
Query: 532 XXXXXXXXN-RVYFKIMSTEDKQYLKLDNTKGSXDDRIIYGDSTADTFKHHWYLEPSMYE 708
N RVYFKIMSTEDKQYLKLDNTKGS DDRIIYGDSTADTFKHHWYLEPSMYE
Sbjct: 146 WKFTPVLENNRVYFKIMSTEDKQYLKLDNTKGSSDDRIIYGDSTADTFKHHWYLEPSMYE 205
Query: 709 SDVMFFVYNRXYNSVMTL 762
SDVMFFVYNR YNSVMTL
Sbjct: 206 SDVMFFVYNREYNSVMTL 223
Score = 148 bits (358), Expect = 2e-34
Identities = 68/73 (93%), Positives = 69/73 (94%)
Frame = +2
Query: 323 NFAYQLWTKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHALKLIXQQNHNKIAFGDSK 502
+FAYQLWTKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHALKLI QQNHNKIAFGDSK
Sbjct: 78 DFAYQLWTKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHALKLIDQQNHNKIAFGDSK 137
Query: 503 DKTSKKVSWXVYP 541
DKTSKKVSW P
Sbjct: 138 DKTSKKVSWKFTP 150
>UniRef50_P09335 Cluster: Low molecular 30 kDa lipoprotein PBMHP-12
precursor; n=5; Bombyx mori|Rep: Low molecular 30 kDa
lipoprotein PBMHP-12 precursor - Bombyx mori (Silk moth)
Length = 264
Score = 95.1 bits (226), Expect = 2e-18
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 7/203 (3%)
Frame = +1
Query: 175 LAEQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMELRLPVMDKGW 354
L ++LY S++ G+Y++A+ K EY + +G +++ V LI + +RNTME K W
Sbjct: 33 LEDKLYNSILTGDYDSAVRKSLEYESQGQGSIVQNVVNNLIIDKRRNTMEYCY----KLW 88
Query: 355 KGNRQILLPH--PV*SDLHRAD--CQAHKQKGPSRPQVDRXTKPQQNCIXXXXXXXXXXX 522
GN Q ++ P+ L A + + ++ T P I
Sbjct: 89 VGNGQDIVKKYFPLSFRLIMAGNYVKLIYRNYNLALKLGSTTNPSNERIAYGDGVDKHTD 148
Query: 523 XXXXXXXXXXXN-RVYFKIMSTEDKQYLKLDNTKGSXD--DRIIYGDSTADTFKHHWYLE 693
N RVYFK +T+ QYLK+ + + + DR++YG ++AD+ + W+ +
Sbjct: 149 LVSWKFITLWENNRVYFKAHNTKYNQYLKMSTSTCNCNARDRVVYGGNSADSTREQWFFQ 208
Query: 694 PSMYESDVMFFVYNRXYNSVMTL 762
P+ YE+DV+FF+YNR +N + L
Sbjct: 209 PAKYENDVLFFIYNRQFNDALEL 231
Score = 63.3 bits (147), Expect = 7e-09
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Frame = +2
Query: 308 RGTPWNFAYQLWTKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHALKLIXQQN--HNK 481
R + Y+LW +G++IVK YFP+ FR+I VKLI + + ALKL N + +
Sbjct: 77 RRNTMEYCYKLWVGNGQDIVKKYFPLSFRLIMAGNYVKLIYRNYNLALKLGSTTNPSNER 136
Query: 482 IAFGDSKDKTSKKVSW 529
IA+GD DK + VSW
Sbjct: 137 IAYGDGVDKHTDLVSW 152
>UniRef50_Q75RW3 Cluster: BmLSP-T; n=2; Bombyx mori|Rep: BmLSP-T -
Bombyx mori (Silk moth)
Length = 267
Score = 78.6 bits (185), Expect = 2e-13
Identities = 37/80 (46%), Positives = 57/80 (71%), Gaps = 4/80 (5%)
Frame = +2
Query: 323 NFAYQLWT--KDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHALKL--IXQQNHNKIAF 490
+ AY+LW + +EIVK YFP+ FR IF+E +VK+INKRD+ A+KL +++++A+
Sbjct: 83 DLAYKLWDYMDESQEIVKEYFPVIFRQIFSENSVKIINKRDNLAIKLGDALDSDNDRVAY 142
Query: 491 GDSKDKTSKKVSWXVYPRVW 550
GD+ DKTS V+W + P +W
Sbjct: 143 GDANDKTSDNVAWKLIP-LW 161
Score = 70.1 bits (164), Expect = 7e-11
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = +1
Query: 556 NRVYFKIMSTEDKQYLKLDNTKGSXD-DRIIYGDSTADTFKHHWYLEPSMYESDVMFFVY 732
NRVYFKI S Q ++ +T + D D +YGD ADT +H WYL P E+ V+F++Y
Sbjct: 164 NRVYFKIFSVHRNQIFEIRHTYLTVDNDHGVYGDDRADTHRHQWYLNPVELENQVLFYIY 223
Query: 733 NRXYNSVMTL 762
NR Y+ + L
Sbjct: 224 NRQYDQALKL 233
Score = 33.5 bits (73), Expect = 6.9
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +1
Query: 571 KIMSTEDKQYLKLDNTKGSXDDRIIYGDSTADTFKH-HWYLEPSMYESDVMFFVYNRXYN 747
KI++ D +KL + S +DR+ YGD+ T + W L P ++ V F +++ N
Sbjct: 117 KIINKRDNLAIKLGDALDSDNDRVAYGDANDKTSDNVAWKLIPLWDDNRVYFKIFSVHRN 176
Query: 748 SVMTL 762
+ +
Sbjct: 177 QIFEI 181
>UniRef50_Q00802 Cluster: Low molecular mass 30 kDa lipoprotein 19G1
precursor; n=3; Bombyx mori|Rep: Low molecular mass 30
kDa lipoprotein 19G1 precursor - Bombyx mori (Silk moth)
Length = 256
Score = 78.6 bits (185), Expect = 2e-13
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 5/209 (2%)
Frame = +1
Query: 172 VLAEQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMELRLPVMDKG 351
+L EQLY SVV+ +Y++A+ K S++L E E E + ++ RN + +
Sbjct: 26 ILEEQLYNSVVVADYDSAVEK-SKHLYE---EKKSEVITNVVNKLIRNNKMNCMEYAYQL 81
Query: 352 W-KGNRQILLP-HPV*SDLHRADCQA---HKQKGPSRPQVDRXTKPQQNCIXXXXXXXXX 516
W +G++ I+ PV L A+ +K+ G + +
Sbjct: 82 WLQGSKDIVRDCFPVEFRLIFAENAIKLMYKRDGLALTLSNDVQGDDGRPRYGDGKDKTS 141
Query: 517 XXXXXXXXXXXXXNRVYFKIMSTEDKQYLKLDNTKGSXDDRIIYGDSTADTFKHHWYLEP 696
N+VYFKI++TE QYL L D + +G ++ D+F+ WYL+P
Sbjct: 142 PRVSWKLIALWENNKVYFKILNTERNQYLVLGVGTNWNGDHMAFGVNSVDSFRAQWYLQP 201
Query: 697 SMYESDVMFFVYNRXYNSVMTLMXIWPPT 783
+ Y++DV+F++YNR Y+ +TL P+
Sbjct: 202 AKYDNDVLFYIYNREYSKALTLSRTVEPS 230
Score = 73.3 bits (172), Expect = 7e-12
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Frame = +2
Query: 326 FAYQLWTKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHALKLI--XQQNHNKIAFGDS 499
+AYQLW + K+IV+ FP++FR+IF E +KL+ KRD AL L Q + + +GD
Sbjct: 77 YAYQLWLQGSKDIVRDCFPVEFRLIFAENAIKLMYKRDGLALTLSNDVQGDDGRPRYGDG 136
Query: 500 KDKTSKKVSWXVYPRVWKTTE 562
KDKTS +VSW + +W+ +
Sbjct: 137 KDKTSPRVSWKLI-ALWENNK 156
>UniRef50_P19616 Cluster: Microvitellogenin precursor; n=3; Manduca
sexta|Rep: Microvitellogenin precursor - Manduca sexta
(Tobacco hawkmoth) (Tobacco hornworm)
Length = 249
Score = 77.8 bits (183), Expect = 3e-13
Identities = 35/74 (47%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
Frame = +2
Query: 326 FAYQLWTKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHALKL--IXQQNHNKIAFGDS 499
+AYQLW+ + ++IVK FPIQFR++ E ++KLINKRD+ A+KL + ++IA+G +
Sbjct: 70 YAYQLWSLEARDIVKERFPIQFRMMLGEHSIKLINKRDNLAMKLGVATDNSGDRIAYGAA 129
Query: 500 KDKTSKKVSWXVYP 541
DKTS +V+W P
Sbjct: 130 DDKTSDRVAWKFVP 143
Score = 72.1 bits (169), Expect = 2e-11
Identities = 30/68 (44%), Positives = 44/68 (64%)
Frame = +1
Query: 559 RVYFKIMSTEDKQYLKLDNTKGSXDDRIIYGDSTADTFKHHWYLEPSMYESDVMFFVYNR 738
RVYFKI++ + QYLKL S + + Y S ADTF+H WYL+P+ + +++FF+ NR
Sbjct: 149 RVYFKILNVQRGQYLKLGVETDSDGEHMAYASSGADTFRHQWYLQPAKADGNLVFFIVNR 208
Query: 739 XYNSVMTL 762
YN + L
Sbjct: 209 EYNHALKL 216
Score = 54.4 bits (125), Expect = 3e-06
Identities = 24/49 (48%), Positives = 36/49 (73%)
Frame = +1
Query: 178 AEQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTME 324
++ +Y +VVIG+ + A+AK E K+ KG++I EAV RLI + +RNTME
Sbjct: 21 SDDIYNNVVIGDIDGAVAKSKELQKQGKGDIITEAVNRLIRDSQRNTME 69
>UniRef50_Q2PQU4 Cluster: Putative paralytic peptide-binding
protein; n=1; Bombyx mori|Rep: Putative paralytic
peptide-binding protein - Bombyx mori (Silk moth)
Length = 436
Score = 63.3 bits (147), Expect = 7e-09
Identities = 29/71 (40%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Frame = +2
Query: 323 NFAYQLWTKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHALKLIXQQNH--NKIAFGD 496
+FAY+LW + K+IV+ YFP +F++I ++ +KLI + ALKL + +++ +GD
Sbjct: 255 SFAYKLWHEGHKDIVEDYFPSEFQLILDQKRIKLIGNHYNQALKLDANVDRYKDRLTWGD 314
Query: 497 SKDKTSKKVSW 529
KD TS +VSW
Sbjct: 315 GKDYTSYRVSW 325
Score = 54.8 bits (126), Expect = 3e-06
Identities = 46/196 (23%), Positives = 74/196 (37%), Gaps = 2/196 (1%)
Frame = +1
Query: 181 EQLYMSVVIGEYETAIAKCSEYLKEKKGE-VIKEAVKRLIENGKRNTMELRLPVMDKGWK 357
+ LY V G+Y A+ K L + +G V ++ V RL+ G +N M + +G K
Sbjct: 208 DHLYNLVTGGDYINAV-KTVRSLDDNQGSGVCRDVVSRLVSQGIKNAMSFAYKLWHEGHK 266
Query: 358 GNRQILLPHPV*SDLHRADCQAHKQKGPSRPQVDRXT-KPQQNCIXXXXXXXXXXXXXXX 534
+ P L + + ++D + +
Sbjct: 267 DIVEDYFPSEFQLILDQKRIKLIGNHYNQALKLDANVDRYKDRLTWGDGKDYTSYRVSWR 326
Query: 535 XXXXXXXNRVYFKIMSTEDKQYLKLDNTKGSXDDRIIYGDSTADTFKHHWYLEPSMYESD 714
N V FKI++TE + YLKLD DR +G + + +H WYL P
Sbjct: 327 LISLWENNNVIFKILNTEHEMYLKLDVNVDRYGDRKTWGSNDSSEKRHTWYLYPVKVGDQ 386
Query: 715 VMFFVYNRXYNSVMTL 762
+F + NR Y + L
Sbjct: 387 QLFLIENREYRQGLKL 402
>UniRef50_Q76IB6 Cluster: Growth blocking peptide binding protein;
n=1; Mythimna separata|Rep: Growth blocking peptide
binding protein - Pseudaletia separata (Oriental
armyworm) (Mythimna separata)
Length = 430
Score = 58.8 bits (136), Expect = 2e-07
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Frame = +2
Query: 323 NFAYQLWTKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHALKLIXQQN--HNKIAFGD 496
+FAY+LW KEIV+++FP F+ IF E V ++NK+ LKL + ++++A+GD
Sbjct: 246 SFAYKLWHGGAKEIVRNHFPKAFQHIFNEDAVTIVNKQYQQPLKLDVNTDSMNDRLAWGD 305
Query: 497 SKD--KTSKKVSWXVYPRVWKTTEFT 568
TS+++SW + P +W T
Sbjct: 306 HNQCKITSERLSWKILP-MWNRDGLT 330
Score = 48.0 bits (109), Expect = 3e-04
Identities = 46/200 (23%), Positives = 76/200 (38%), Gaps = 6/200 (3%)
Frame = +1
Query: 181 EQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMELRLPVMDKGWKG 360
E++Y SV+ G+Y+ A+ Y E V RL+ R M + G K
Sbjct: 199 EEVYNSVINGDYDAAVNMAQSYGVASNSEFTNRIVTRLMTAFPRKLMSFAYKLWHGGAKE 258
Query: 361 NRQILLPHPV*SDLHRADCQAHKQKGPSRP-QVDRXTKPQQNCIXXXXXXXXXXXXXXXX 537
+ P + D K +P ++D T + +
Sbjct: 259 IVRNHFPKAF-QHIFNEDAVTIVNKQYQQPLKLDVNTDSMNDRLAWGDHNQCKITSERLS 317
Query: 538 XXXXXX-NR--VYFKIMSTEDKQYLKLDNTKGSXDDRIIYGDSTADTFKHHWYLEP--SM 702
NR + FK+ + YLKLD + S DR +G + ++ +H +YLEP S
Sbjct: 318 WKILPMWNRDGLTFKLYNVHRNMYLKLDASVDSMGDRQAWGSNNSNEDRHRYYLEPMISP 377
Query: 703 YESDVMFFVYNRXYNSVMTL 762
+ ++FF+ N Y + L
Sbjct: 378 HNGTLVFFIINYKYGQGLKL 397
>UniRef50_Q3EAX7 Cluster: Uncharacterized protein At3g29080.1; n=1;
Arabidopsis thaliana|Rep: Uncharacterized protein
At3g29080.1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 445
Score = 34.3 bits (75), Expect = 4.0
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 249 EGKEGRGYQGSREASDRKRQEEHHGTSPTSYGQRMERK 362
E +EG GY EA D +R+ +H TS ++ G ERK
Sbjct: 395 EAEEGSGYHQRWEALDSRRKHDHSRTSGSALGTGTERK 432
>UniRef50_Q06G81 Cluster: Putative uncharacterized protein; n=1;
Rhodococcus sp. NS1|Rep: Putative uncharacterized
protein - Rhodococcus sp. NS1
Length = 123
Score = 33.9 bits (74), Expect = 5.3
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -2
Query: 822 NRXFSXXPKXHGXXWRPYXHQCHNTVVLSVVDEEHDV-AFVHGGLKVPVVFEGVSGAITV 646
NR + K HG W+PY VV + VD+E + + G ++ + V GA+ V
Sbjct: 57 NRVATLIAKAHGFVWQPYV----GAVVFTSVDDEGETQSLREGQVEALLTTARVGGAVVV 112
Query: 645 DDTV 634
D TV
Sbjct: 113 DATV 116
>UniRef50_Q7SCR0 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 562
Score = 33.9 bits (74), Expect = 5.3
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +2
Query: 533 VYPRVWKTTEFTSRSCPPRTNST*SSITRKVLXMT---VSSTVIAPLTPSNTTGTLSPP 700
VYP ++TT RS P +++ SSI+ V T SS ++P+T SN+ SPP
Sbjct: 81 VYPVGYQTTSHLPRSPPEARSASVSSISSSVSHGTPDMSSSRTMSPVTDSNSDTMASPP 139
>UniRef50_UPI0000E80401 Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 423
Score = 33.5 bits (73), Expect = 6.9
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +3
Query: 171 RTGGAAVYECRHW*IRDRYRQML*ISEGKEGRGYQG-SREASDRKRQEEHHGTSPTSYGQ 347
R GGAA CRH RDR R ++G+E G +G R + + GT P + G
Sbjct: 311 RRGGAAAPTCRH---RDRPRPAAASAQGEEKGGGEGKERPGMGGELRTSGGGTGPAAVGT 367
Query: 348 RMER 359
R R
Sbjct: 368 RSPR 371
>UniRef50_Q8I123 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 808
Score = 33.5 bits (73), Expect = 6.9
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +2
Query: 539 PRVWKTTEFTSRSCPPRTNST*SSITRKVLXMTVSSTVIAPLTPSNTT 682
P V TT S + PP ++T + +T+ V ST IAP+T +TT
Sbjct: 423 PDVTSTTTTKSSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVTMPSTT 470
>UniRef50_Q55PE8 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 1167
Score = 33.5 bits (73), Expect = 6.9
Identities = 13/44 (29%), Positives = 29/44 (65%)
Frame = +1
Query: 250 KEKKGEVIKEAVKRLIENGKRNTMELRLPVMDKGWKGNRQILLP 381
+++KG + + V+ ++NGK++ + P+MD+ +G+R+ L P
Sbjct: 988 RDEKGGFVWDQVETPMDNGKKSLAMVPSPIMDREVEGDREYLCP 1031
>UniRef50_Q189A8 Cluster: Putative iron-sulfur cluster protein; n=3;
Clostridiales|Rep: Putative iron-sulfur cluster protein
- Clostridium difficile (strain 630)
Length = 304
Score = 33.1 bits (72), Expect = 9.2
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +1
Query: 196 SVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKR 312
+ ++G Y+ KC Y+ +KKG+ + E K +++NGK+
Sbjct: 191 NAILGNYDMNPKKCLSYITQKKGD-LSEKEKVVLKNGKK 228
>UniRef50_Q23036 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 592
Score = 33.1 bits (72), Expect = 9.2
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 551 KTTEFTSRSCP-PRTNST*SSITRKVLXMTVSSTVIAPLTPSNTTGTLSPPCT 706
KTT FT+ P P T ST +S T V + S+T TP T T + P T
Sbjct: 434 KTTIFTTTPVPCPTTTSTTTSATTLVPTTSSSTTTTTTTTPVPVTSTTTEPTT 486
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,862,256
Number of Sequences: 1657284
Number of extensions: 13020019
Number of successful extensions: 40715
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 38985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40685
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75423184424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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