Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_H19
         (856 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    25   0.76 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   4.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   5.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.4  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   9.4  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 25.0 bits (52), Expect = 0.76
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +2

Query: 296 SKTARGTPWNFAYQLWTKDGKEIVKSYFPI-QFRVIFTEQTVKLINKRDHHALKLI 460
           S++ RG   N+     T   KE++   F + +FR+    Q  K+I + DH ALK +
Sbjct: 632 SRSLRGPELNY-----TTTEKELLGVIFALHKFRIYI--QVTKIIIRTDHQALKFL 680


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 515 CWFCLWSHRMQFCCGFV 465
           C F +++  + FCC F+
Sbjct: 171 CAFIIFTMHLLFCCAFI 187


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -2

Query: 522 TFLLVLSLESPNAILLWFCXSINLRA*WSLLFMSLTV 412
           T+L+    E  +  +LW C S N      +L +S TV
Sbjct: 242 TYLIWTIYEMYHLAILWSCTSTNCPRFLIMLALSYTV 278


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 562  VYFKIMSTEDKQYLKLDNTK 621
            VY+K +ST+DK  +K  + K
Sbjct: 1236 VYYKPVSTDDKTEVKPTSQK 1255


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 12/52 (23%), Positives = 20/52 (38%)
 Frame = +2

Query: 425 INKRDHHALKLIXQQNHNKIAFGDSKDKTSKKVSWXVYPRVWKTTEFTSRSC 580
           + K+    + L  Q+NH KI++   +             R+W     T R C
Sbjct: 301 VQKKLQKEIDLTLQENHGKISYNVLQSMKYLDQVVCESLRLWPPAPQTDRLC 352


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,385
Number of Sequences: 336
Number of extensions: 3391
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23659332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)