Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_H19
         (856 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    24   1.6  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    24   1.6  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    24   1.6  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   4.7  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   4.7  

>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 223 AIAKCSEYLKEKKGEVIKEAVKRLIEN 303
           A+A   +   +K+ EVIK+ +K L+EN
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVEN 97


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 223 AIAKCSEYLKEKKGEVIKEAVKRLIEN 303
           A+A   +   +K+ EVIK+ +K L+EN
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVEN 97


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 223 AIAKCSEYLKEKKGEVIKEAVKRLIEN 303
           A+A   +   +K+ EVIK+ +K L+EN
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVEN 97


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
 Frame = -2

Query: 204 DDTHIQLLRQYXXSAWCKCGVRSQRNNTART---KANKXRXRLGAXXSFESRHNTQSMKE 34
           D   +Q+ R    S  C C      N   R      N+    LG+  ++ S+HNTQ   +
Sbjct: 339 DTQFLQVCRSRRHSDSC-CLCLDSMNAVIRNFNESENRRNSCLGSTETYYSKHNTQQFTQ 397


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 528 GKFTPVFGKQQSLLQDHVHRGQTVPEAR*HERF 626
           G +T    + Q ++Q HV    T+PE +   RF
Sbjct: 378 GNYTCHAVRNQDVVQTHVLTIHTIPEVKVTPRF 410


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,640
Number of Sequences: 438
Number of extensions: 3804
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)